Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRFBP1Q8NEF9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 MKRN4P-201ENST00000444706 1521 ntBASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 AC073314.1-201ENST00000568729 2216 ntBASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 AL050303.2-201ENST00000619798 666 ntBASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 LINC01521-201ENST00000504184 1943 ntBASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRFBP1Q8NEF9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 AC093787.1-201ENST00000450396 207 ntBASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRFBP1Q8NEF9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 AC083906.2-201ENST00000511578 360 ntBASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFBP1Q8NEF9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 GPX1P1-201ENST00000388829 606 ntBASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 LSM12P1-201ENST00000411836 588 ntBASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 NCF1B-203ENST00000435988 1254 ntBASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFBP1Q8NEF9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.27■□□□□ 0.68
SRFBP1Q8NEF9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms