Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL162412.1-201ENST00000567129 965 ntBASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.06■□□□□ 0.64
SIMC1Q8NDZ2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 CYP21A1P-202ENST00000354927 1481 ntBASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 AL355472.2-201ENST00000422958 438 ntBASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SIMC1Q8NDZ2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.04■□□□□ 0.64
SIMC1Q8NDZ2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.03■□□□□ 0.64
SIMC1Q8NDZ2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 AC020907.5-201ENST00000624372 1936 ntBASIC19.02■□□□□ 0.64
SIMC1Q8NDZ2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms