Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 CYP2D8P-201ENST00000433633 1490 ntBASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
LINC00116Q8NCU8 UNC93B2-201ENST00000285383 730 ntBASIC25.87■■□□□ 1.73
LINC00116Q8NCU8 AC113347.1-201ENST00000413321 391 ntBASIC25.87■■□□□ 1.73
LINC00116Q8NCU8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.87■■□□□ 1.73
LINC00116Q8NCU8 AL390955.1-201ENST00000428694 934 ntBASIC25.87■■□□□ 1.73
LINC00116Q8NCU8 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.87■■□□□ 1.73
LINC00116Q8NCU8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
LINC00116Q8NCU8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.87■■□□□ 1.73
LINC00116Q8NCU8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
LINC00116Q8NCU8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
LINC00116Q8NCU8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LINC00116Q8NCU8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LINC00116Q8NCU8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
LINC00116Q8NCU8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 LINC01568-207ENST00000641790 1380 ntBASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 AL031963.3-201ENST00000606441 850 ntBASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LINC00116Q8NCU8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.84■■□□□ 1.73
LINC00116Q8NCU8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LINC00116Q8NCU8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LINC00116Q8NCU8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.84■■□□□ 1.73
LINC00116Q8NCU8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
LINC00116Q8NCU8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.84■■□□□ 1.73
LINC00116Q8NCU8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.84■■□□□ 1.73
LINC00116Q8NCU8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
LINC00116Q8NCU8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
LINC00116Q8NCU8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC25.84■■□□□ 1.73
LINC00116Q8NCU8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
LINC00116Q8NCU8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 AC073508.3-201ENST00000619697 1419 ntBASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 TERF1P1-201ENST00000311003 1181 ntBASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 AC010947.1-201ENST00000623454 693 ntBASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
LINC00116Q8NCU8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.83■■□□□ 1.72
LINC00116Q8NCU8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
LINC00116Q8NCU8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
LINC00116Q8NCU8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.82■■□□□ 1.72
LINC00116Q8NCU8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
LINC00116Q8NCU8 AL121906.2-201ENST00000621597 723 ntBASIC25.82■■□□□ 1.72
LINC00116Q8NCU8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LINC00116Q8NCU8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LINC00116Q8NCU8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.82■■□□□ 1.72
LINC00116Q8NCU8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LINC00116Q8NCU8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
LINC00116Q8NCU8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.81■■□□□ 1.72
LINC00116Q8NCU8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
LINC00116Q8NCU8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.81■■□□□ 1.72
LINC00116Q8NCU8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
LINC00116Q8NCU8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms