Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNEP1R1Q8N9A8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNEP1R1Q8N9A8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNEP1R1Q8N9A8 AC027702.1-201ENST00000563810 1770 ntBASIC18.01■□□□□ 0.47
CNEP1R1Q8N9A8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CNEP1R1Q8N9A8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNEP1R1Q8N9A8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 AC079834.2-201ENST00000609776 1949 ntBASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 AL158047.1-201ENST00000445918 881 ntBASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18■□□□□ 0.47
CNEP1R1Q8N9A8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 KRT17P3-201ENST00000420566 1262 ntBASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 AC008403.3-201ENST00000598924 454 ntBASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CNEP1R1Q8N9A8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 AL390719.1-204ENST00000412397 1219 ntBASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 AC142381.4-202ENST00000563973 229 ntBASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CNEP1R1Q8N9A8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 AC098590.1-201ENST00000468126 897 ntBASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 RPS2P52-201ENST00000469610 820 ntBASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 MIR2861-201ENST00000636310 90 ntBASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CNEP1R1Q8N9A8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms