Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
VPS8Q8N3P4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
VPS8Q8N3P4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC31.85■■■□□ 2.69
VPS8Q8N3P4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
VPS8Q8N3P4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
VPS8Q8N3P4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
VPS8Q8N3P4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
VPS8Q8N3P4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
VPS8Q8N3P4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
VPS8Q8N3P4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC31.85■■■□□ 2.69
VPS8Q8N3P4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
VPS8Q8N3P4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC31.85■■■□□ 2.69
VPS8Q8N3P4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC31.84■■■□□ 2.69
VPS8Q8N3P4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 RER1-204ENST00000378518 522 ntTSL 3 BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 AC128676.1-201ENST00000454392 318 ntBASIC31.83■■■□□ 2.69
VPS8Q8N3P4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 AC008687.6-201ENST00000596318 630 ntBASIC31.83■■■□□ 2.69
VPS8Q8N3P4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 TMEM191A-211ENST00000637163 1067 ntBASIC31.83■■■□□ 2.69
VPS8Q8N3P4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC31.83■■■□□ 2.69
VPS8Q8N3P4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
VPS8Q8N3P4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
VPS8Q8N3P4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
VPS8Q8N3P4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC31.81■■■□□ 2.68
VPS8Q8N3P4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC31.81■■■□□ 2.68
VPS8Q8N3P4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC31.81■■■□□ 2.68
VPS8Q8N3P4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC31.81■■■□□ 2.68
VPS8Q8N3P4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
VPS8Q8N3P4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
VPS8Q8N3P4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
VPS8Q8N3P4 POM121L13P-201ENST00000422362 380 ntBASIC31.81■■■□□ 2.68
VPS8Q8N3P4 CLDN5-201ENST00000403084 2357 ntBASIC31.81■■■□□ 2.68
VPS8Q8N3P4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
VPS8Q8N3P4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
VPS8Q8N3P4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC31.79■■■□□ 2.68
VPS8Q8N3P4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
VPS8Q8N3P4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
VPS8Q8N3P4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
VPS8Q8N3P4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
VPS8Q8N3P4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
VPS8Q8N3P4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC31.79■■■□□ 2.68
VPS8Q8N3P4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
VPS8Q8N3P4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
VPS8Q8N3P4 AL031963.3-201ENST00000606441 850 ntBASIC31.79■■■□□ 2.68
VPS8Q8N3P4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
VPS8Q8N3P4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC31.78■■■□□ 2.68
VPS8Q8N3P4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC31.78■■■□□ 2.68
VPS8Q8N3P4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
VPS8Q8N3P4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC31.78■■■□□ 2.68
VPS8Q8N3P4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
VPS8Q8N3P4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
VPS8Q8N3P4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC31.78■■■□□ 2.68
VPS8Q8N3P4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC31.78■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms