Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 IKBKGP1-201ENST00000612193 1073 ntBASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 AC092437.1-201ENST00000624794 1048 ntBASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE9Q8IYJ1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 AL162412.1-201ENST00000567129 965 ntBASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 CYP21A1P-202ENST00000354927 1481 ntBASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE9Q8IYJ1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 AL162377.1-201ENST00000618844 1793 ntBASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE9Q8IYJ1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPNE9Q8IYJ1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
CPNE9Q8IYJ1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.02■□□□□ 0.79
CPNE9Q8IYJ1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPNE9Q8IYJ1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 CYP2T1P-201ENST00000432607 1285 ntBASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 AC087633.2-202ENST00000565166 1439 ntBASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CPNE9Q8IYJ1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 RARRES2P4-201ENST00000514074 484 ntBASIC20■□□□□ 0.79
CPNE9Q8IYJ1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 AC231657.2-201ENST00000624556 255 ntBASIC20■□□□□ 0.79
CPNE9Q8IYJ1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CPNE9Q8IYJ1 PCDHAC2-203ENST00000615316 3011 ntBASIC20■□□□□ 0.79
CPNE9Q8IYJ1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE9Q8IYJ1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE9Q8IYJ1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.99■□□□□ 0.79
CPNE9Q8IYJ1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE9Q8IYJ1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPNE9Q8IYJ1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms