Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD2Q8IV50 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 AC092720.2-201ENST00000602388 1665 ntBASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LYSMD2Q8IV50 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LYSMD2Q8IV50 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 AC018470.1-201ENST00000624790 3129 ntBASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 AC010997.5-201ENST00000609182 354 ntBASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LYSMD2Q8IV50 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LYSMD2Q8IV50 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 NOC2LP1-202ENST00000452600 2235 ntBASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 pRNA.6-201ENST00000610482 90 ntBASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 pRNA.5-201ENST00000612139 90 ntBASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 pRNA.11-201ENST00000618423 90 ntBASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 pRNA.13-201ENST00000619112 90 ntBASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LYSMD2Q8IV50 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms