Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZC3HC1Q86WB0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZC3HC1Q86WB0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 AC087623.3-201ENST00000607047 1098 ntBASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZC3HC1Q86WB0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 AC087633.2-202ENST00000565166 1439 ntBASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.13■□□□□ 0.81
ZC3HC1Q86WB0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 AL356652.1-201ENST00000615962 565 ntBASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.12■□□□□ 0.81
ZC3HC1Q86WB0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 PGM5P4-201ENST00000421970 445 ntBASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 AL162412.1-201ENST00000567129 965 ntBASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 CYP21A1P-202ENST00000354927 1481 ntBASIC20.11■□□□□ 0.81
ZC3HC1Q86WB0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3HC1Q86WB0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms