Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DENND4AQ7Z401 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DENND4AQ7Z401 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DENND4AQ7Z401 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 UNC93B2-201ENST00000285383 730 ntBASIC21.03■□□□□ 0.96
DENND4AQ7Z401 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 FAM197Y1-201ENST00000421178 764 ntBASIC21.03■□□□□ 0.96
DENND4AQ7Z401 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DENND4AQ7Z401 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 AL355355.2-201ENST00000442321 338 ntBASIC21.02■□□□□ 0.96
DENND4AQ7Z401 KRT18P57-201ENST00000443599 1254 ntBASIC21.02■□□□□ 0.96
DENND4AQ7Z401 MIR2861-201ENST00000636310 90 ntBASIC21.02■□□□□ 0.96
DENND4AQ7Z401 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DENND4AQ7Z401 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 AC005521.1-201ENST00000393351 872 ntBASIC21.01■□□□□ 0.95
DENND4AQ7Z401 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 AC023632.3-201ENST00000521633 145 ntBASIC21.01■□□□□ 0.95
DENND4AQ7Z401 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.01■□□□□ 0.95
DENND4AQ7Z401 GOLGA2P6-201ENST00000340929 2049 ntBASIC21■□□□□ 0.95
DENND4AQ7Z401 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21■□□□□ 0.95
DENND4AQ7Z401 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
DENND4AQ7Z401 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
DENND4AQ7Z401 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21■□□□□ 0.95
DENND4AQ7Z401 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21■□□□□ 0.95
DENND4AQ7Z401 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
DENND4AQ7Z401 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21■□□□□ 0.95
DENND4AQ7Z401 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21■□□□□ 0.95
DENND4AQ7Z401 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21■□□□□ 0.95
DENND4AQ7Z401 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21■□□□□ 0.95
DENND4AQ7Z401 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21■□□□□ 0.95
DENND4AQ7Z401 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.99■□□□□ 0.95
DENND4AQ7Z401 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 NIFKP9-201ENST00000419265 221 ntBASIC20.98■□□□□ 0.95
DENND4AQ7Z401 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 AP000525.1-201ENST00000608286 694 ntBASIC20.98■□□□□ 0.95
DENND4AQ7Z401 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DENND4AQ7Z401 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms