Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 KRT18P6-201ENST00000555540 1265 ntBASIC20.31■□□□□ 0.84
USP45Q70EL2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.31■□□□□ 0.84
USP45Q70EL2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.31■□□□□ 0.84
USP45Q70EL2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP45Q70EL2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP45Q70EL2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.31■□□□□ 0.84
USP45Q70EL2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP45Q70EL2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
USP45Q70EL2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP45Q70EL2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP45Q70EL2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP45Q70EL2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP45Q70EL2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP45Q70EL2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP45Q70EL2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
USP45Q70EL2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP45Q70EL2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP45Q70EL2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP45Q70EL2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.3■□□□□ 0.84
USP45Q70EL2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.3■□□□□ 0.84
USP45Q70EL2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.3■□□□□ 0.84
USP45Q70EL2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.3■□□□□ 0.84
USP45Q70EL2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
USP45Q70EL2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP45Q70EL2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP45Q70EL2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.3■□□□□ 0.84
USP45Q70EL2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
USP45Q70EL2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP45Q70EL2 AC092720.2-201ENST00000602388 1665 ntBASIC20.29■□□□□ 0.84
USP45Q70EL2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP45Q70EL2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
USP45Q70EL2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.29■□□□□ 0.84
USP45Q70EL2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP45Q70EL2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP45Q70EL2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.29■□□□□ 0.84
USP45Q70EL2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.29■□□□□ 0.84
USP45Q70EL2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP45Q70EL2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP45Q70EL2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.29■□□□□ 0.84
USP45Q70EL2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.29■□□□□ 0.84
USP45Q70EL2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
USP45Q70EL2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.29■□□□□ 0.84
USP45Q70EL2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP45Q70EL2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP45Q70EL2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP45Q70EL2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP45Q70EL2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
USP45Q70EL2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP45Q70EL2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.28■□□□□ 0.84
USP45Q70EL2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.28■□□□□ 0.84
USP45Q70EL2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP45Q70EL2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
USP45Q70EL2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP45Q70EL2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
USP45Q70EL2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.28■□□□□ 0.84
USP45Q70EL2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP45Q70EL2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.28■□□□□ 0.84
USP45Q70EL2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
USP45Q70EL2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP45Q70EL2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USP45Q70EL2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP45Q70EL2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.28■□□□□ 0.84
USP45Q70EL2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP45Q70EL2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.28■□□□□ 0.84
USP45Q70EL2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USP45Q70EL2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP45Q70EL2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP45Q70EL2 HLA-B-256ENST00000639848 1089 ntBASIC20.28■□□□□ 0.84
USP45Q70EL2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.28■□□□□ 0.84
USP45Q70EL2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USP45Q70EL2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
USP45Q70EL2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP45Q70EL2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
USP45Q70EL2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
USP45Q70EL2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.27■□□□□ 0.84
USP45Q70EL2 RNA5SP413-201ENST00000516373 109 ntBASIC20.27■□□□□ 0.84
USP45Q70EL2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.27■□□□□ 0.84
USP45Q70EL2 CD99P1-205ENST00000527459 561 ntBASIC20.27■□□□□ 0.84
USP45Q70EL2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 AC060766.5-201ENST00000590539 871 ntBASIC20.27■□□□□ 0.84
USP45Q70EL2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP45Q70EL2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP45Q70EL2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP45Q70EL2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.27■□□□□ 0.83
USP45Q70EL2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.27■□□□□ 0.83
USP45Q70EL2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP45Q70EL2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USP45Q70EL2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.26■□□□□ 0.83
USP45Q70EL2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.26■□□□□ 0.83
USP45Q70EL2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms