Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTL4Q6ZR62 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.93■□□□□ 0.62
RTL4Q6ZR62 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTL4Q6ZR62 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 MCRIP2P1-201ENST00000394346 511 ntBASIC18.92■□□□□ 0.62
RTL4Q6ZR62 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 AC098934.4-201ENST00000564127 592 ntBASIC18.92■□□□□ 0.62
RTL4Q6ZR62 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL4Q6ZR62 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 LSM12P1-201ENST00000411836 588 ntBASIC18.91■□□□□ 0.62
RTL4Q6ZR62 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 AC006128.1-201ENST00000624704 1661 ntBASIC18.91■□□□□ 0.62
RTL4Q6ZR62 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTL4Q6ZR62 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 FEM1AP1-201ENST00000431297 1995 ntBASIC18.9■□□□□ 0.62
RTL4Q6ZR62 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.9■□□□□ 0.62
RTL4Q6ZR62 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.9■□□□□ 0.62
RTL4Q6ZR62 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms