Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 AC142381.4-202ENST00000563973 229 ntBASIC19.34■□□□□ 0.69
PRAMEF17Q5VTA0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.34■□□□□ 0.69
PRAMEF17Q5VTA0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.34■□□□□ 0.69
PRAMEF17Q5VTA0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.34■□□□□ 0.69
PRAMEF17Q5VTA0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF17Q5VTA0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF17Q5VTA0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF17Q5VTA0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF17Q5VTA0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PRAMEF17Q5VTA0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEF17Q5VTA0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEF17Q5VTA0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEF17Q5VTA0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEF17Q5VTA0 AC026310.3-201ENST00000625186 2373 ntBASIC19.33■□□□□ 0.69
PRAMEF17Q5VTA0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEF17Q5VTA0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
PRAMEF17Q5VTA0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 AC121338.2-201ENST00000622535 1744 ntBASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.33■□□□□ 0.68
PRAMEF17Q5VTA0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 AC027702.1-201ENST00000563810 1770 ntBASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF17Q5VTA0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 PGM5P4-201ENST00000421970 445 ntBASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 AC006557.6-201ENST00000623071 864 ntBASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF17Q5VTA0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 PLK5-205ENST00000642079 1969 ntBASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PRAMEF17Q5VTA0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.29■□□□□ 0.68
PRAMEF17Q5VTA0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms