Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC18Q5T9S5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
CCDC18Q5T9S5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC31.55■■■□□ 2.64
CCDC18Q5T9S5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
CCDC18Q5T9S5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CCDC18Q5T9S5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC31.55■■■□□ 2.64
CCDC18Q5T9S5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC18Q5T9S5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 AL049796.1-201ENST00000565336 1766 ntBASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC18Q5T9S5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 ECEL1P3-201ENST00000427961 737 ntBASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC18Q5T9S5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 KRT17P2-201ENST00000300992 1314 ntBASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 AL024507.2-201ENST00000606070 2574 ntBASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
CCDC18Q5T9S5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CCDC18Q5T9S5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC31.51■■■□□ 2.64
CCDC18Q5T9S5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC31.51■■■□□ 2.63
CCDC18Q5T9S5 KRT16P5-201ENST00000455284 522 ntBASIC31.51■■■□□ 2.63
CCDC18Q5T9S5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC31.51■■■□□ 2.63
CCDC18Q5T9S5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC31.51■■■□□ 2.63
CCDC18Q5T9S5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC31.51■■■□□ 2.63
CCDC18Q5T9S5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC31.51■■■□□ 2.63
CCDC18Q5T9S5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC31.5■■■□□ 2.63
CCDC18Q5T9S5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC18Q5T9S5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC31.5■■■□□ 2.63
CCDC18Q5T9S5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC31.5■■■□□ 2.63
CCDC18Q5T9S5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC31.5■■■□□ 2.63
CCDC18Q5T9S5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC18Q5T9S5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC31.5■■■□□ 2.63
CCDC18Q5T9S5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC31.5■■■□□ 2.63
CCDC18Q5T9S5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC31.5■■■□□ 2.63
CCDC18Q5T9S5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC18Q5T9S5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 AL353807.1-201ENST00000427475 662 ntBASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CCDC18Q5T9S5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC18Q5T9S5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
CCDC18Q5T9S5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC18Q5T9S5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC18Q5T9S5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC18Q5T9S5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC31.48■■■□□ 2.63
CCDC18Q5T9S5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
CCDC18Q5T9S5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC31.48■■■□□ 2.63
CCDC18Q5T9S5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC18Q5T9S5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CCDC18Q5T9S5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms