Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 AC138932.1-201ENST00000534164 6830 ntBASIC19.66■□□□□ 0.74
SGO1Q5FBB7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 AL162377.1-201ENST00000618844 1793 ntBASIC19.66■□□□□ 0.74
SGO1Q5FBB7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 MIR6821-201ENST00000617625 74 ntBASIC19.66■□□□□ 0.74
SGO1Q5FBB7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.66■□□□□ 0.74
SGO1Q5FBB7 AFG3L1P-217ENST00000557444 2447 ntBASIC19.65■□□□□ 0.74
SGO1Q5FBB7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 SMG8-203ENST00000578922 2178 ntBASIC19.65■□□□□ 0.74
SGO1Q5FBB7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SGO1Q5FBB7 AC099778.1-201ENST00000568593 1911 ntBASIC19.64■□□□□ 0.74
SGO1Q5FBB7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SGO1Q5FBB7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.74
SGO1Q5FBB7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.64■□□□□ 0.74
SGO1Q5FBB7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
SGO1Q5FBB7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.64■□□□□ 0.73
SGO1Q5FBB7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SGO1Q5FBB7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 CDV3P1-201ENST00000471403 739 ntBASIC19.63■□□□□ 0.73
SGO1Q5FBB7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SGO1Q5FBB7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SGO1Q5FBB7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms