Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 YEL018C-AYEL018C-A 534 nt1.55□□□□□ -2.16
CLP1Q08685 BI2Q0110 1272 nt1.55□□□□□ -2.16
CLP1Q08685 RPC10YHR143W-A 213 nt1.55□□□□□ -2.16
CLP1Q08685 YIL102CYIL102C 306 nt1.55□□□□□ -2.16
CLP1Q08685 RPL40AYIL148W 387 nt1.55□□□□□ -2.16
CLP1Q08685 YKL111CYKL111C 336 nt1.55□□□□□ -2.16
CLP1Q08685 YLR171WYLR171W 390 nt1.55□□□□□ -2.16
CLP1Q08685 snR41snR41 95 nt1.55□□□□□ -2.16
CLP1Q08685 MUD2YKL074C 1584 nt1.55□□□□□ -2.16
CLP1Q08685 UBP11YKR098C 2154 nt1.54□□□□□ -2.16
CLP1Q08685 YLR422WYLR422W 5799 nt1.54□□□□□ -2.16
CLP1Q08685 YDR286CYDR286C 345 nt1.54□□□□□ -2.16
CLP1Q08685 ATP17YDR377W 306 nt1.54□□□□□ -2.16
CLP1Q08685 HOP2YGL033W 657 nt1.54□□□□□ -2.16
CLP1Q08685 VAR1Q0140 1197 nt1.54□□□□□ -2.16
CLP1Q08685 AIM29YKR074W 468 nt1.54□□□□□ -2.16
CLP1Q08685 YML108WYML108W 318 nt1.54□□□□□ -2.16
CLP1Q08685 RUF22RUF22 515 nt1.54□□□□□ -2.16
CLP1Q08685 YGR109W-BYGR109W-B 4644 nt1.54□□□□□ -2.16
CLP1Q08685 PET127YOR017W 2403 nt1.54□□□□□ -2.16
CLP1Q08685 SEC21YNL287W 2808 nt1.53□□□□□ -2.16
CLP1Q08685 YJL007CYJL007C 315 nt1.53□□□□□ -2.16
CLP1Q08685 NUP82YJL061W 2142 nt1.53□□□□□ -2.16
CLP1Q08685 SNC1YAL030W 354 nt1.53□□□□□ -2.16
CLP1Q08685 IRC19YLL033W 693 nt1.53□□□□□ -2.16
CLP1Q08685 YLR269CYLR269C 351 nt1.53□□□□□ -2.16
CLP1Q08685 LSM7YNL147W 348 nt1.53□□□□□ -2.16
CLP1Q08685 YPL205CYPL205C 345 nt1.53□□□□□ -2.16
CLP1Q08685 HKR1YDR420W 5409 nt1.53□□□□□ -2.16
CLP1Q08685 BST1YFL025C 3090 nt1.52□□□□□ -2.17
CLP1Q08685 NOP53YPL146C 1368 nt1.52□□□□□ -2.17
CLP1Q08685 YDL025W-AYDL025W-A 105 nt1.52□□□□□ -2.17
CLP1Q08685 YDL068WYDL068W 330 nt1.52□□□□□ -2.17
CLP1Q08685 YLR222C-AYLR222C-A 231 nt1.52□□□□□ -2.17
CLP1Q08685 SEN15YMR059W 387 nt1.52□□□□□ -2.17
CLP1Q08685 YBR076C-AYBR076C-A 267 nt1.52□□□□□ -2.17
CLP1Q08685 RPB5YBR154C 648 nt1.52□□□□□ -2.17
CLP1Q08685 FRK1YPL141C 2598 nt1.52□□□□□ -2.17
CLP1Q08685 COX1Q0045 1605 nt1.51□□□□□ -2.17
CLP1Q08685 NCL1YBL024W 2055 nt1.51□□□□□ -2.17
CLP1Q08685 YER188C-AYER188C-A 300 nt1.51□□□□□ -2.17
CLP1Q08685 ECL1YGR146C 636 nt1.51□□□□□ -2.17
CLP1Q08685 tT(UGU)Q1tT(UGU)Q1 76 nt1.51□□□□□ -2.17
CLP1Q08685 PFD1YJL179W 330 nt1.51□□□□□ -2.17
CLP1Q08685 YLR140WYLR140W 327 nt1.51□□□□□ -2.17
CLP1Q08685 YOR248WYOR248W 303 nt1.51□□□□□ -2.17
CLP1Q08685 BPH1YCR032W 6504 nt1.51□□□□□ -2.17
CLP1Q08685 GNT1YOR320C 1476 nt1.5□□□□□ -2.17
CLP1Q08685 YBR012W-AYBR012W-A 1323 nt1.5□□□□□ -2.17
CLP1Q08685 YOR142W-AYOR142W-A 1323 nt1.5□□□□□ -2.17
CLP1Q08685 YPR158W-AYPR158W-A 1323 nt1.5□□□□□ -2.17
CLP1Q08685 COX7YMR256C 183 nt1.5□□□□□ -2.17
CLP1Q08685 SLM6YBR266C 453 nt1.5□□□□□ -2.17
CLP1Q08685 BFA1YJR053W 1725 nt1.49□□□□□ -2.17
CLP1Q08685 PPN1YDR452W 2025 nt1.49□□□□□ -2.17
CLP1Q08685 YDL062WYDL062W 426 nt1.49□□□□□ -2.17
CLP1Q08685 MZM1YDR493W 372 nt1.49□□□□□ -2.17
CLP1Q08685 YHR139C-AYHR139C-A 312 nt1.49□□□□□ -2.17
CLP1Q08685 YHR214W-AYHR214W-A 486 nt1.49□□□□□ -2.17
CLP1Q08685 YAR068WYAR068W 486 nt1.49□□□□□ -2.17
CLP1Q08685 YMR324CYMR324C 243 nt1.49□□□□□ -2.17
CLP1Q08685 YNL010WYNL010W 726 nt1.49□□□□□ -2.17
CLP1Q08685 TSC3YBR058C-A 243 nt1.49□□□□□ -2.17
CLP1Q08685 snR54snR54 86 nt1.49□□□□□ -2.17
CLP1Q08685 VPS52YDR484W 1926 nt1.48□□□□□ -2.17
CLP1Q08685 YGR130CYGR130C 2451 nt1.48□□□□□ -2.17
CLP1Q08685 PIK1YNL267W 3201 nt1.48□□□□□ -2.17
CLP1Q08685 NAN1YPL126W 2691 nt1.48□□□□□ -2.17
CLP1Q08685 IML1YJR138W 4755 nt1.48□□□□□ -2.17
CLP1Q08685 MSN5YDR335W 3675 nt1.48□□□□□ -2.17
CLP1Q08685 HMLALPHA2YCL067C 633 nt1.48□□□□□ -2.17
CLP1Q08685 MATALPHA2YCR039C 633 nt1.48□□□□□ -2.17
CLP1Q08685 NOP10YHR072W-A 177 nt1.48□□□□□ -2.17
CLP1Q08685 YHR125WYHR125W 306 nt1.48□□□□□ -2.17
CLP1Q08685 YMR153C-AYMR153C-A 336 nt1.48□□□□□ -2.17
CLP1Q08685 TIF11YMR260C 462 nt1.48□□□□□ -2.17
CLP1Q08685 CDC33YOL139C 642 nt1.48□□□□□ -2.17
CLP1Q08685 YPR039WYPR039W 336 nt1.48□□□□□ -2.17
CLP1Q08685 SPC98YNL126W 2541 nt1.48□□□□□ -2.17
CLP1Q08685 RSM22YKL155C 1887 nt1.48□□□□□ -2.17
CLP1Q08685 GDS1YOR355W 1569 nt1.47□□□□□ -2.17
CLP1Q08685 YDL041WYDL041W 354 nt1.47□□□□□ -2.17
CLP1Q08685 YGR025WYGR025W 303 nt1.47□□□□□ -2.17
CLP1Q08685 NBL1YHR199C-A 222 nt1.47□□□□□ -2.17
CLP1Q08685 GRX8YLR364W 330 nt1.47□□□□□ -2.17
CLP1Q08685 HMI1YOL095C 2121 nt1.47□□□□□ -2.17
CLP1Q08685 ROX1YPR065W 1107 nt1.47□□□□□ -2.17
CLP1Q08685 IRE1YHR079C 3348 nt1.47□□□□□ -2.17
CLP1Q08685 YOR343W-BYOR343W-B 5313 nt1.46□□□□□ -2.18
CLP1Q08685 YBP1YBR216C 2025 nt1.46□□□□□ -2.18
CLP1Q08685 YGR042WYGR042W 816 nt1.46□□□□□ -2.18
CLP1Q08685 VOA1YGR106C 798 nt1.46□□□□□ -2.18
CLP1Q08685 YLR101CYLR101C 396 nt1.46□□□□□ -2.18
CLP1Q08685 YLR264C-AYLR264C-A 117 nt1.46□□□□□ -2.18
CLP1Q08685 CMC2YBL059C-A 330 nt1.46□□□□□ -2.18
CLP1Q08685 snR13snR13 124 nt1.46□□□□□ -2.18
CLP1Q08685 EGD1YPL037C 474 nt1.46□□□□□ -2.18
CLP1Q08685 RTC6YPL183W-A 282 nt1.46□□□□□ -2.18
CLP1Q08685 snR79snR79 84 nt1.45□□□□□ -2.18
CLP1Q08685 YER006C-AYER006C-A 318 nt1.45□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 48.3 ms