Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 PFF1YBR074W 2931 nt2.62□□□□□ -1.99
NHX1Q04121 YHL041WYHL041W 450 nt2.61□□□□□ -1.99
NHX1Q04121 YPL152W-AYPL152W-A 99 nt2.61□□□□□ -1.99
NHX1Q04121 RPL36BYPL249C-A 303 nt2.61□□□□□ -1.99
NHX1Q04121 YOP1YPR028W 543 nt2.61□□□□□ -1.99
NHX1Q04121 snR51snR51 107 nt2.61□□□□□ -1.99
NHX1Q04121 SMY1YKL079W 1971 nt2.61□□□□□ -1.99
NHX1Q04121 ISW1YBR245C 3390 nt2.61□□□□□ -1.99
NHX1Q04121 YNL018CYNL018C 1839 nt2.61□□□□□ -1.99
NHX1Q04121 SEF1YBL066C 3447 nt2.61□□□□□ -1.99
NHX1Q04121 PRE4YFR050C 801 nt2.6□□□□□ -1.99
NHX1Q04121 SAR1YPL218W 573 nt2.6□□□□□ -1.99
NHX1Q04121 SAP1YER047C 2694 nt2.6□□□□□ -1.99
NHX1Q04121 CDC53YDL132W 2448 nt2.6□□□□□ -1.99
NHX1Q04121 YDR239CYDR239C 2364 nt2.59□□□□□ -1.99
NHX1Q04121 PEP3YLR148W 2757 nt2.59□□□□□ -1.99
NHX1Q04121 YBR184WYBR184W 1572 nt2.59□□□□□ -1.99
NHX1Q04121 MCM22YJR135C 720 nt2.59□□□□□ -1.99
NHX1Q04121 MF(ALPHA)1YPL187W 498 nt2.59□□□□□ -1.99
NHX1Q04121 STB4YMR019W 2850 nt2.59□□□□□ -2
NHX1Q04121 RIM20YOR275C 1986 nt2.58□□□□□ -2
NHX1Q04121 YDR048CYDR048C 315 nt2.58□□□□□ -2
NHX1Q04121 tW(CCA)G1tW(CCA)G1 72 nt2.58□□□□□ -2
NHX1Q04121 tW(CCA)G2tW(CCA)G2 72 nt2.58□□□□□ -2
NHX1Q04121 tW(CCA)JtW(CCA)J 72 nt2.58□□□□□ -2
NHX1Q04121 tW(CCA)KtW(CCA)K 72 nt2.58□□□□□ -2
NHX1Q04121 tW(CCA)MtW(CCA)M 72 nt2.58□□□□□ -2
NHX1Q04121 tW(CCA)PtW(CCA)P 72 nt2.58□□□□□ -2
NHX1Q04121 HHT1YBR010W 411 nt2.58□□□□□ -2
NHX1Q04121 KEL2YGR238C 2649 nt2.58□□□□□ -2
NHX1Q04121 PDR1YGL013C 3207 nt2.58□□□□□ -2
NHX1Q04121 TOP2YNL088W 4287 nt2.57□□□□□ -2
NHX1Q04121 SNF5YBR289W 2718 nt2.57□□□□□ -2
NHX1Q04121 PEX8YGR077C 1770 nt2.57□□□□□ -2
NHX1Q04121 SRO77YBL106C 3033 nt2.57□□□□□ -2
NHX1Q04121 SCH9YHR205W 2475 nt2.57□□□□□ -2
NHX1Q04121 YER079C-AYER079C-A 339 nt2.57□□□□□ -2
NHX1Q04121 RPL38YLR325C 237 nt2.57□□□□□ -2
NHX1Q04121 PTP3YER075C 2787 nt2.57□□□□□ -2
NHX1Q04121 DNA2YHR164C 4569 nt2.56□□□□□ -2
NHX1Q04121 YHR032W-AYHR032W-A 180 nt2.56□□□□□ -2
NHX1Q04121 YJL015CYJL015C 285 nt2.56□□□□□ -2
NHX1Q04121 DAD3YBR233W-A 285 nt2.56□□□□□ -2
NHX1Q04121 PEX4YGR133W 552 nt2.55□□□□□ -2
NHX1Q04121 ACM1YPL267W 630 nt2.55□□□□□ -2
NHX1Q04121 SMY2YBR172C 2223 nt2.55□□□□□ -2
NHX1Q04121 SWR1YDR334W 4545 nt2.55□□□□□ -2
NHX1Q04121 TRS130YMR218C 3309 nt2.55□□□□□ -2
NHX1Q04121 FKS3YMR306W 5358 nt2.55□□□□□ -2
NHX1Q04121 MNL2YLR057W 2550 nt2.55□□□□□ -2
NHX1Q04121 SGM1YJR134C 2124 nt2.54□□□□□ -2
NHX1Q04121 SWA2YDR320C 2007 nt2.54□□□□□ -2
NHX1Q04121 YKU80YMR106C 1890 nt2.54□□□□□ -2
NHX1Q04121 MGM1YOR211C 2646 nt2.54□□□□□ -2
NHX1Q04121 YDR344CYDR344C 444 nt2.54□□□□□ -2
NHX1Q04121 YIL102CYIL102C 306 nt2.54□□□□□ -2
NHX1Q04121 YLR053CYLR053C 327 nt2.54□□□□□ -2
NHX1Q04121 RPS29AYLR388W 171 nt2.54□□□□□ -2
NHX1Q04121 NUT2YPR168W 474 nt2.54□□□□□ -2
NHX1Q04121 VPH1YOR270C 2523 nt2.54□□□□□ -2
NHX1Q04121 DBP6YNR038W 1890 nt2.54□□□□□ -2
NHX1Q04121 SIR3YLR442C 2937 nt2.53□□□□□ -2
NHX1Q04121 FAR11YNL127W 2862 nt2.53□□□□□ -2
NHX1Q04121 YDR286CYDR286C 345 nt2.53□□□□□ -2
NHX1Q04121 HYP2YEL034W 474 nt2.53□□□□□ -2
NHX1Q04121 YOR333CYOR333C 417 nt2.53□□□□□ -2
NHX1Q04121 VPS34YLR240W 2628 nt2.52□□□□□ -2.01
NHX1Q04121 YBL083CYBL083C 426 nt2.52□□□□□ -2.01
NHX1Q04121 NUM1YDR150W 8247 nt2.52□□□□□ -2.01
NHX1Q04121 HDA3YPR179C 1968 nt2.52□□□□□ -2.01
NHX1Q04121 YDR098C-BYDR098C-B 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YDR210C-DYDR210C-D 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YDR316W-BYDR316W-B 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YDR365W-BYDR365W-B 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YER138CYER138C 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YER160CYER160C 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YGR038C-BYGR038C-B 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YGR161C-DYGR161C-D 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YJR027WYJR027W 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YLR157C-BYLR157C-B 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YBL005W-BYBL005W-B 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YML039WYML039W 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YML045WYML045W 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YMR050CYMR050C 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YOL103W-BYOL103W-B 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YBR012W-BYBR012W-B 5271 nt2.51□□□□□ -2.01
NHX1Q04121 YOR142W-BYOR142W-B 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YPL257W-BYPL257W-B 5268 nt2.51□□□□□ -2.01
NHX1Q04121 YPR158W-BYPR158W-B 5271 nt2.51□□□□□ -2.01
NHX1Q04121 EFR3YMR212C 2349 nt2.51□□□□□ -2.01
NHX1Q04121 ARP8YOR141C 2646 nt2.51□□□□□ -2.01
NHX1Q04121 NPC2YDL046W 522 nt2.51□□□□□ -2.01
NHX1Q04121 CYC7YEL039C 342 nt2.51□□□□□ -2.01
NHX1Q04121 HOP2YGL033W 657 nt2.51□□□□□ -2.01
NHX1Q04121 ALG13YGL047W 609 nt2.51□□□□□ -2.01
NHX1Q04121 YML007C-AYML007C-A 111 nt2.51□□□□□ -2.01
NHX1Q04121 YOR055WYOR055W 435 nt2.51□□□□□ -2.01
NHX1Q04121 LCL1YPL056C 306 nt2.51□□□□□ -2.01
NHX1Q04121 SET2YJL168C 2202 nt2.51□□□□□ -2.01
NHX1Q04121 GRR1YJR090C 3456 nt2.51□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms