Protein–RNA interactions for Protein: Q01064

PDE1B, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B, humanhuman

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1BQ01064 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
PDE1BQ01064 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PDE1BQ01064 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PDE1BQ01064 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1BQ01064 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1BQ01064 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1BQ01064 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.66■□□□□ 0.9
PDE1BQ01064 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PDE1BQ01064 AC007322.4-201ENST00000509611 723 ntBASIC20.66■□□□□ 0.9
PDE1BQ01064 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE1BQ01064 AL162412.1-201ENST00000567129 965 ntBASIC20.66■□□□□ 0.9
PDE1BQ01064 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PDE1BQ01064 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.66■□□□□ 0.9
PDE1BQ01064 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.66■□□□□ 0.9
PDE1BQ01064 BID-214ENST00000617586 542 ntTSL 5 BASIC20.66■□□□□ 0.9
PDE1BQ01064 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.66■□□□□ 0.9
PDE1BQ01064 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1BQ01064 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE1BQ01064 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.66■□□□□ 0.9
PDE1BQ01064 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1BQ01064 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1BQ01064 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE1BQ01064 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE1BQ01064 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE1BQ01064 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
PDE1BQ01064 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1BQ01064 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1BQ01064 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.65■□□□□ 0.9
PDE1BQ01064 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE1BQ01064 AC004911.1-201ENST00000416316 871 ntBASIC20.65■□□□□ 0.9
PDE1BQ01064 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE1BQ01064 AC007322.3-201ENST00000426526 701 ntBASIC20.65■□□□□ 0.9
PDE1BQ01064 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1BQ01064 AC090192.1-201ENST00000517740 490 ntBASIC20.65■□□□□ 0.9
PDE1BQ01064 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1BQ01064 MFSD11-216ENST00000590393 1141 ntBASIC20.65■□□□□ 0.9
PDE1BQ01064 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1BQ01064 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PDE1BQ01064 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE1BQ01064 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1BQ01064 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDE1BQ01064 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
PDE1BQ01064 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDE1BQ01064 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDE1BQ01064 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.64■□□□□ 0.9
PDE1BQ01064 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDE1BQ01064 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1BQ01064 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1BQ01064 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1BQ01064 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.64■□□□□ 0.89
PDE1BQ01064 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.64■□□□□ 0.89
PDE1BQ01064 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.89
PDE1BQ01064 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.64■□□□□ 0.89
PDE1BQ01064 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PDE1BQ01064 AL591742.1-201ENST00000604433 565 ntBASIC20.64■□□□□ 0.89
PDE1BQ01064 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1BQ01064 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1BQ01064 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1BQ01064 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1BQ01064 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1BQ01064 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1BQ01064 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PDE1BQ01064 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.64■□□□□ 0.89
PDE1BQ01064 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
PDE1BQ01064 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE1BQ01064 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
PDE1BQ01064 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE1BQ01064 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE1BQ01064 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE1BQ01064 AC011767.1-201ENST00000617410 1153 ntBASIC20.63■□□□□ 0.89
PDE1BQ01064 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.63■□□□□ 0.89
PDE1BQ01064 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE1BQ01064 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE1BQ01064 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PDE1BQ01064 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDE1BQ01064 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PDE1BQ01064 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1BQ01064 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.62■□□□□ 0.89
PDE1BQ01064 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE1BQ01064 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE1BQ01064 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDE1BQ01064 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PDE1BQ01064 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PDE1BQ01064 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDE1BQ01064 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE1BQ01064 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.62■□□□□ 0.89
PDE1BQ01064 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms