Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.31■□□□□ 0.52
RPS4XP62701 FAM21FP-204ENST00000608637 956 ntBASIC18.31■□□□□ 0.52
RPS4XP62701 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.31■□□□□ 0.52
RPS4XP62701 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RPS4XP62701 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.31■□□□□ 0.52
RPS4XP62701 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPS4XP62701 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RPS4XP62701 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4XP62701 AC112907.3-201ENST00000577781 2400 ntBASIC18.3■□□□□ 0.52
RPS4XP62701 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.3■□□□□ 0.52
RPS4XP62701 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4XP62701 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4XP62701 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.3■□□□□ 0.52
RPS4XP62701 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4XP62701 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.3■□□□□ 0.52
RPS4XP62701 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.3■□□□□ 0.52
RPS4XP62701 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4XP62701 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4XP62701 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4XP62701 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.3■□□□□ 0.52
RPS4XP62701 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.3■□□□□ 0.52
RPS4XP62701 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPS4XP62701 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4XP62701 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS4XP62701 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4XP62701 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.29■□□□□ 0.52
RPS4XP62701 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4XP62701 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4XP62701 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4XP62701 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.29■□□□□ 0.52
RPS4XP62701 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS4XP62701 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS4XP62701 DUX4L16-201ENST00000555130 1264 ntBASIC18.29■□□□□ 0.52
RPS4XP62701 AC005181.1-201ENST00000604782 1256 ntBASIC18.29■□□□□ 0.52
RPS4XP62701 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.29■□□□□ 0.52
RPS4XP62701 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.29■□□□□ 0.52
RPS4XP62701 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS4XP62701 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4XP62701 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS4XP62701 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.29■□□□□ 0.52
RPS4XP62701 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS4XP62701 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4XP62701 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4XP62701 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.28■□□□□ 0.52
RPS4XP62701 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.28■□□□□ 0.52
RPS4XP62701 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.28■□□□□ 0.52
RPS4XP62701 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.28■□□□□ 0.52
RPS4XP62701 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4XP62701 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4XP62701 TCF3P1-201ENST00000423021 1937 ntBASIC18.28■□□□□ 0.52
RPS4XP62701 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4XP62701 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4XP62701 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RPS4XP62701 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RPS4XP62701 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.28■□□□□ 0.52
RPS4XP62701 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.28■□□□□ 0.52
RPS4XP62701 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RPS4XP62701 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
RPS4XP62701 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RPS4XP62701 AC010536.3-201ENST00000620306 533 ntBASIC18.28■□□□□ 0.52
RPS4XP62701 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.28■□□□□ 0.52
RPS4XP62701 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4XP62701 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
RPS4XP62701 SMG8-203ENST00000578922 2178 ntBASIC18.28■□□□□ 0.52
RPS4XP62701 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4XP62701 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.28■□□□□ 0.52
RPS4XP62701 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RPS4XP62701 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4XP62701 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS4XP62701 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.28■□□□□ 0.52
RPS4XP62701 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4XP62701 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4XP62701 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.27■□□□□ 0.52
RPS4XP62701 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4XP62701 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.27■□□□□ 0.52
RPS4XP62701 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4XP62701 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.27■□□□□ 0.52
RPS4XP62701 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4XP62701 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
RPS4XP62701 TERF1P5-201ENST00000477545 1207 ntBASIC18.27■□□□□ 0.52
RPS4XP62701 AC007322.4-201ENST00000509611 723 ntBASIC18.27■□□□□ 0.52
RPS4XP62701 AC083906.2-201ENST00000511578 360 ntBASIC18.27■□□□□ 0.52
RPS4XP62701 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.27■□□□□ 0.52
RPS4XP62701 AL162412.1-201ENST00000567129 965 ntBASIC18.27■□□□□ 0.52
RPS4XP62701 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS4XP62701 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
RPS4XP62701 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RPS4XP62701 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPS4XP62701 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RPS4XP62701 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPS4XP62701 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
RPS4XP62701 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RPS4XP62701 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPS4XP62701 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RPS4XP62701 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4XP62701 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4XP62701 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4XP62701 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPS4XP62701 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.26■□□□□ 0.51
RPS4XP62701 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms