Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
AP3S2P59780 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3S2P59780 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
AP3S2P59780 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
AP3S2P59780 KRT125P-201ENST00000546827 989 ntBASIC17.38■□□□□ 0.37
AP3S2P59780 AC010997.5-201ENST00000609182 354 ntBASIC17.38■□□□□ 0.37
AP3S2P59780 TMEM179-206ENST00000616017 1645 ntBASIC17.38■□□□□ 0.37
AP3S2P59780 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
AP3S2P59780 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.38■□□□□ 0.37
AP3S2P59780 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
AP3S2P59780 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.38■□□□□ 0.37
AP3S2P59780 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
AP3S2P59780 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
AP3S2P59780 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP3S2P59780 KRT8P33-201ENST00000508125 1423 ntBASIC17.38■□□□□ 0.37
AP3S2P59780 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
AP3S2P59780 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
AP3S2P59780 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.37■□□□□ 0.37
AP3S2P59780 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
AP3S2P59780 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
AP3S2P59780 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.37■□□□□ 0.37
AP3S2P59780 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.37■□□□□ 0.37
AP3S2P59780 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.37■□□□□ 0.37
AP3S2P59780 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3S2P59780 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
AP3S2P59780 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3S2P59780 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3S2P59780 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
AP3S2P59780 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.36■□□□□ 0.37
AP3S2P59780 MIR3181-201ENST00000578512 73 ntBASIC17.36■□□□□ 0.37
AP3S2P59780 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
AP3S2P59780 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3S2P59780 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.36■□□□□ 0.37
AP3S2P59780 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
AP3S2P59780 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
AP3S2P59780 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.36■□□□□ 0.37
AP3S2P59780 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3S2P59780 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S2P59780 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3S2P59780 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
AP3S2P59780 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
AP3S2P59780 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S2P59780 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3S2P59780 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3S2P59780 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
AP3S2P59780 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3S2P59780 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
AP3S2P59780 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3S2P59780 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3S2P59780 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AP3S2P59780 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
AP3S2P59780 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S2P59780 AC055733.4-201ENST00000638462 1354 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms