Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.69■□□□□ 0.58
PER3P56645 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.69■□□□□ 0.58
PER3P56645 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.69■□□□□ 0.58
PER3P56645 AC073912.3-201ENST00000624414 853 ntBASIC18.69■□□□□ 0.58
PER3P56645 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PER3P56645 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PER3P56645 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PER3P56645 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PER3P56645 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PER3P56645 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PER3P56645 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PER3P56645 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PER3P56645 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PER3P56645 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PER3P56645 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PER3P56645 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PER3P56645 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PER3P56645 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PER3P56645 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.68■□□□□ 0.58
PER3P56645 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PER3P56645 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.68■□□□□ 0.58
PER3P56645 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.68■□□□□ 0.58
PER3P56645 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.68■□□□□ 0.58
PER3P56645 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.68■□□□□ 0.58
PER3P56645 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.68■□□□□ 0.58
PER3P56645 AC060766.5-201ENST00000590539 871 ntBASIC18.68■□□□□ 0.58
PER3P56645 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PER3P56645 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PER3P56645 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PER3P56645 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PER3P56645 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PER3P56645 AC061975.6-201ENST00000579045 1553 ntBASIC18.68■□□□□ 0.58
PER3P56645 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PER3P56645 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PER3P56645 AL157384.1-201ENST00000445995 2473 ntBASIC18.67■□□□□ 0.58
PER3P56645 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.67■□□□□ 0.58
PER3P56645 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PER3P56645 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PER3P56645 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.67■□□□□ 0.58
PER3P56645 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PER3P56645 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PER3P56645 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PER3P56645 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PER3P56645 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PER3P56645 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.67■□□□□ 0.58
PER3P56645 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.67■□□□□ 0.58
PER3P56645 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.67■□□□□ 0.58
PER3P56645 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.67■□□□□ 0.58
PER3P56645 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.67■□□□□ 0.58
PER3P56645 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.67■□□□□ 0.58
PER3P56645 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PER3P56645 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PER3P56645 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PER3P56645 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PER3P56645 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PER3P56645 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PER3P56645 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.67■□□□□ 0.58
PER3P56645 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PER3P56645 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PER3P56645 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PER3P56645 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PER3P56645 KRT17P3-201ENST00000420566 1262 ntBASIC18.66■□□□□ 0.58
PER3P56645 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.66■□□□□ 0.58
PER3P56645 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.66■□□□□ 0.58
PER3P56645 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.66■□□□□ 0.58
PER3P56645 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PER3P56645 MIR4497-201ENST00000583208 89 ntBASIC18.66■□□□□ 0.58
PER3P56645 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PER3P56645 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.66■□□□□ 0.58
PER3P56645 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PER3P56645 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PER3P56645 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.65■□□□□ 0.58
PER3P56645 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PER3P56645 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
PER3P56645 FAM99A-202ENST00000538190 1989 ntBASIC18.65■□□□□ 0.58
PER3P56645 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.65■□□□□ 0.58
PER3P56645 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PER3P56645 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.65■□□□□ 0.58
PER3P56645 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.65■□□□□ 0.58
PER3P56645 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.65■□□□□ 0.58
PER3P56645 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.65■□□□□ 0.58
PER3P56645 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.65■□□□□ 0.58
PER3P56645 HLA-B-256ENST00000639848 1089 ntBASIC18.65■□□□□ 0.58
PER3P56645 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PER3P56645 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
PER3P56645 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PER3P56645 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.64■□□□□ 0.57
PER3P56645 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PER3P56645 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms