Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXG1P55316 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXG1P55316 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXG1P55316 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXG1P55316 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
FOXG1P55316 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXG1P55316 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXG1P55316 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXG1P55316 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXG1P55316 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXG1P55316 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
FOXG1P55316 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXG1P55316 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXG1P55316 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXG1P55316 TSPY20P-201ENST00000450910 630 ntBASIC17.79■□□□□ 0.44
FOXG1P55316 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.79■□□□□ 0.44
FOXG1P55316 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXG1P55316 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
FOXG1P55316 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXG1P55316 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXG1P55316 AC073314.1-201ENST00000568729 2216 ntBASIC17.79■□□□□ 0.44
FOXG1P55316 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FOXG1P55316 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
FOXG1P55316 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXG1P55316 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FOXG1P55316 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
FOXG1P55316 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXG1P55316 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
FOXG1P55316 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXG1P55316 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.78■□□□□ 0.44
FOXG1P55316 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
FOXG1P55316 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXG1P55316 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXG1P55316 AL157384.1-201ENST00000445995 2473 ntBASIC17.78■□□□□ 0.44
FOXG1P55316 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXG1P55316 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXG1P55316 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXG1P55316 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
FOXG1P55316 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXG1P55316 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXG1P55316 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXG1P55316 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXG1P55316 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
FOXG1P55316 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXG1P55316 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
FOXG1P55316 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXG1P55316 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXG1P55316 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXG1P55316 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
FOXG1P55316 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.77■□□□□ 0.43
FOXG1P55316 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
FOXG1P55316 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FOXG1P55316 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
FOXG1P55316 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXG1P55316 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXG1P55316 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXG1P55316 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXG1P55316 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXG1P55316 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
FOXG1P55316 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXG1P55316 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FOXG1P55316 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXG1P55316 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXG1P55316 AC060766.5-201ENST00000590539 871 ntBASIC17.76■□□□□ 0.43
FOXG1P55316 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXG1P55316 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXG1P55316 HLA-B-256ENST00000639848 1089 ntBASIC17.76■□□□□ 0.43
FOXG1P55316 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXG1P55316 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXG1P55316 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXG1P55316 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FOXG1P55316 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXG1P55316 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXG1P55316 AC092667.1-201ENST00000434301 2586 ntBASIC17.76■□□□□ 0.43
FOXG1P55316 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FOXG1P55316 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
FOXG1P55316 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 AC092368.3-202ENST00000574180 1591 ntBASIC17.75■□□□□ 0.43
FOXG1P55316 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXG1P55316 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXG1P55316 PKD1P6-201ENST00000343738 4769 ntBASIC17.75■□□□□ 0.43
FOXG1P55316 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXG1P55316 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXG1P55316 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms