Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH13P55290 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH13P55290 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH13P55290 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH13P55290 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH13P55290 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH13P55290 UBE2DNL-204ENST00000602536 740 ntBASIC19.79■□□□□ 0.76
CDH13P55290 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDH13P55290 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH13P55290 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH13P55290 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDH13P55290 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH13P55290 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.79■□□□□ 0.76
CDH13P55290 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CDH13P55290 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH13P55290 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH13P55290 KRT8P36-201ENST00000489121 1440 ntBASIC19.78■□□□□ 0.76
CDH13P55290 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDH13P55290 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH13P55290 AC007952.6-201ENST00000573168 2673 ntBASIC19.78■□□□□ 0.76
CDH13P55290 AC003957.1-201ENST00000625108 2673 ntBASIC19.78■□□□□ 0.76
CDH13P55290 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH13P55290 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH13P55290 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH13P55290 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH13P55290 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH13P55290 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDH13P55290 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH13P55290 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH13P55290 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH13P55290 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH13P55290 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH13P55290 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CDH13P55290 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.77■□□□□ 0.76
CDH13P55290 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.77■□□□□ 0.76
CDH13P55290 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH13P55290 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH13P55290 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH13P55290 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH13P55290 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH13P55290 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH13P55290 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH13P55290 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.77■□□□□ 0.76
CDH13P55290 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH13P55290 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDH13P55290 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH13P55290 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH13P55290 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDH13P55290 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH13P55290 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH13P55290 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH13P55290 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH13P55290 DPP3P2-201ENST00000416030 1696 ntBASIC19.76■□□□□ 0.75
CDH13P55290 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH13P55290 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH13P55290 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH13P55290 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH13P55290 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH13P55290 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH13P55290 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CDH13P55290 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CDH13P55290 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH13P55290 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH13P55290 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH13P55290 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH13P55290 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH13P55290 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH13P55290 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH13P55290 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH13P55290 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH13P55290 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH13P55290 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH13P55290 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH13P55290 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH13P55290 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH13P55290 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CDH13P55290 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH13P55290 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH13P55290 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH13P55290 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDH13P55290 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.74■□□□□ 0.75
CDH13P55290 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH13P55290 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDH13P55290 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH13P55290 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms