Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.83■□□□□ 0.61
CDH12P55289 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.83■□□□□ 0.61
CDH12P55289 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH12P55289 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CDH12P55289 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH12P55289 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.83■□□□□ 0.6
CDH12P55289 SLC7A5P2-201ENST00000553010 536 ntBASIC18.83■□□□□ 0.6
CDH12P55289 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.83■□□□□ 0.6
CDH12P55289 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH12P55289 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH12P55289 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH12P55289 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
CDH12P55289 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH12P55289 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CDH12P55289 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH12P55289 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH12P55289 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH12P55289 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CDH12P55289 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH12P55289 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH12P55289 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDH12P55289 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CDH12P55289 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH12P55289 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CDH12P55289 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH12P55289 AC245052.3-201ENST00000450182 901 ntBASIC18.82■□□□□ 0.6
CDH12P55289 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH12P55289 KRT18P14-201ENST00000534205 1250 ntBASIC18.82■□□□□ 0.6
CDH12P55289 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH12P55289 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH12P55289 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH12P55289 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH12P55289 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH12P55289 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH12P55289 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
CDH12P55289 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH12P55289 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH12P55289 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH12P55289 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH12P55289 SMG8-203ENST00000578922 2178 ntBASIC18.82■□□□□ 0.6
CDH12P55289 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH12P55289 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH12P55289 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH12P55289 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CDH12P55289 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDH12P55289 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CDH12P55289 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDH12P55289 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH12P55289 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH12P55289 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDH12P55289 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.81■□□□□ 0.6
CDH12P55289 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.81■□□□□ 0.6
CDH12P55289 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.81■□□□□ 0.6
CDH12P55289 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH12P55289 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.81■□□□□ 0.6
CDH12P55289 AC087289.5-201ENST00000586076 3175 ntBASIC18.81■□□□□ 0.6
CDH12P55289 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH12P55289 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDH12P55289 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH12P55289 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH12P55289 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH12P55289 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH12P55289 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDH12P55289 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH12P55289 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH12P55289 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH12P55289 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH12P55289 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH12P55289 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH12P55289 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH12P55289 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH12P55289 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH12P55289 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH12P55289 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CDH12P55289 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH12P55289 AC004854.2-201ENST00000608450 1441 ntBASIC18.8■□□□□ 0.6
CDH12P55289 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH12P55289 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH12P55289 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH12P55289 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms