Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.27■■□□□ 1
ATXN1P54253 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.27■■□□□ 1
ATXN1P54253 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATXN1P54253 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATXN1P54253 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ATXN1P54253 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATXN1P54253 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.27■■□□□ 1
ATXN1P54253 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATXN1P54253 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATXN1P54253 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATXN1P54253 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.27■■□□□ 1
ATXN1P54253 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.27■■□□□ 1
ATXN1P54253 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.27■■□□□ 1
ATXN1P54253 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.27■■□□□ 1
ATXN1P54253 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.27■■□□□ 1
ATXN1P54253 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATXN1P54253 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.27■■□□□ 1
ATXN1P54253 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.27■■□□□ 1
ATXN1P54253 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.27■■□□□ 1
ATXN1P54253 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
ATXN1P54253 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
ATXN1P54253 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATXN1P54253 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.27■□□□□ 0.99
ATXN1P54253 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.27■□□□□ 0.99
ATXN1P54253 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATXN1P54253 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATXN1P54253 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.26■□□□□ 0.99
ATXN1P54253 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATXN1P54253 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATXN1P54253 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATXN1P54253 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATXN1P54253 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATXN1P54253 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.26■□□□□ 0.99
ATXN1P54253 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.26■□□□□ 0.99
ATXN1P54253 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.26■□□□□ 0.99
ATXN1P54253 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.26■□□□□ 0.99
ATXN1P54253 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
ATXN1P54253 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.26■□□□□ 0.99
ATXN1P54253 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.26■□□□□ 0.99
ATXN1P54253 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.26■□□□□ 0.99
ATXN1P54253 AC073912.3-201ENST00000624414 853 ntBASIC21.26■□□□□ 0.99
ATXN1P54253 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.26■□□□□ 0.99
ATXN1P54253 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.26■□□□□ 0.99
ATXN1P54253 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.26■□□□□ 0.99
ATXN1P54253 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATXN1P54253 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.26■□□□□ 0.99
ATXN1P54253 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.26■□□□□ 0.99
ATXN1P54253 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.26■□□□□ 0.99
ATXN1P54253 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.25■□□□□ 0.99
ATXN1P54253 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATXN1P54253 MKRN4P-201ENST00000444706 1521 ntBASIC21.25■□□□□ 0.99
ATXN1P54253 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATXN1P54253 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
ATXN1P54253 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATXN1P54253 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATXN1P54253 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.25■□□□□ 0.99
ATXN1P54253 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.25■□□□□ 0.99
ATXN1P54253 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.25■□□□□ 0.99
ATXN1P54253 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
ATXN1P54253 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATXN1P54253 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATXN1P54253 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATXN1P54253 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.25■□□□□ 0.99
ATXN1P54253 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATXN1P54253 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATXN1P54253 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN1P54253 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ATXN1P54253 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.24■□□□□ 0.99
ATXN1P54253 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN1P54253 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN1P54253 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.24■□□□□ 0.99
ATXN1P54253 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ATXN1P54253 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.24■□□□□ 0.99
ATXN1P54253 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.24■□□□□ 0.99
ATXN1P54253 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN1P54253 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.24■□□□□ 0.99
ATXN1P54253 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN1P54253 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN1P54253 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN1P54253 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN1P54253 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN1P54253 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN1P54253 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN1P54253 KRT17P1-201ENST00000399211 1546 ntBASIC21.24■□□□□ 0.99
ATXN1P54253 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
ATXN1P54253 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN1P54253 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ATXN1P54253 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ATXN1P54253 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.23■□□□□ 0.99
ATXN1P54253 AC087633.2-202ENST00000565166 1439 ntBASIC21.23■□□□□ 0.99
ATXN1P54253 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ATXN1P54253 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN1P54253 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN1P54253 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN1P54253 MCRIP2P1-201ENST00000394346 511 ntBASIC21.23■□□□□ 0.99
ATXN1P54253 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN1P54253 AC211429.1-201ENST00000415277 523 ntBASIC21.23■□□□□ 0.99
ATXN1P54253 AL512625.2-201ENST00000417533 625 ntBASIC21.23■□□□□ 0.99
ATXN1P54253 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.23■□□□□ 0.99
ATXN1P54253 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms