Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLNS1AP54105 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.09■□□□□ 0.81
CLNS1AP54105 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLNS1AP54105 AL136116.3-201ENST00000402907 1138 ntBASIC20.09■□□□□ 0.81
CLNS1AP54105 AC133561.4-201ENST00000566112 224 ntBASIC20.09■□□□□ 0.81
CLNS1AP54105 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.09■□□□□ 0.81
CLNS1AP54105 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.09■□□□□ 0.81
CLNS1AP54105 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CLNS1AP54105 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLNS1AP54105 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLNS1AP54105 AC020763.4-201ENST00000623414 4170 ntBASIC20.09■□□□□ 0.81
CLNS1AP54105 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLNS1AP54105 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLNS1AP54105 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLNS1AP54105 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLNS1AP54105 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLNS1AP54105 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.08■□□□□ 0.81
CLNS1AP54105 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLNS1AP54105 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLNS1AP54105 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLNS1AP54105 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLNS1AP54105 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.08■□□□□ 0.81
CLNS1AP54105 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLNS1AP54105 MIR4767-201ENST00000582827 78 ntBASIC20.08■□□□□ 0.81
CLNS1AP54105 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLNS1AP54105 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CLNS1AP54105 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.08■□□□□ 0.8
CLNS1AP54105 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLNS1AP54105 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.08■□□□□ 0.8
CLNS1AP54105 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CLNS1AP54105 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.07■□□□□ 0.8
CLNS1AP54105 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CLNS1AP54105 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CLNS1AP54105 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.07■□□□□ 0.8
CLNS1AP54105 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.07■□□□□ 0.8
CLNS1AP54105 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.07■□□□□ 0.8
CLNS1AP54105 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.07■□□□□ 0.8
CLNS1AP54105 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.07■□□□□ 0.8
CLNS1AP54105 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 AC233992.3-201ENST00000607491 485 ntBASIC20.07■□□□□ 0.8
CLNS1AP54105 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
CLNS1AP54105 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLNS1AP54105 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLNS1AP54105 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.06■□□□□ 0.8
CLNS1AP54105 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.06■□□□□ 0.8
CLNS1AP54105 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.06■□□□□ 0.8
CLNS1AP54105 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
CLNS1AP54105 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.06■□□□□ 0.8
CLNS1AP54105 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.06■□□□□ 0.8
CLNS1AP54105 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CLNS1AP54105 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.06■□□□□ 0.8
CLNS1AP54105 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLNS1AP54105 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.05■□□□□ 0.8
CLNS1AP54105 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CLNS1AP54105 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.05■□□□□ 0.8
CLNS1AP54105 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.05■□□□□ 0.8
CLNS1AP54105 AC009237.3-201ENST00000393279 1427 ntBASIC20.05■□□□□ 0.8
CLNS1AP54105 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.05■□□□□ 0.8
CLNS1AP54105 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLNS1AP54105 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms