Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.43■■□□□ 1.02
CLCN4P51793 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.43■■□□□ 1.02
CLCN4P51793 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.43■■□□□ 1.02
CLCN4P51793 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.43■■□□□ 1.02
CLCN4P51793 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CLCN4P51793 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.43■■□□□ 1.02
CLCN4P51793 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CLCN4P51793 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLCN4P51793 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN4P51793 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN4P51793 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN4P51793 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN4P51793 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN4P51793 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CLCN4P51793 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CLCN4P51793 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.42■■□□□ 1.02
CLCN4P51793 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN4P51793 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN4P51793 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.42■■□□□ 1.02
CLCN4P51793 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.42■■□□□ 1.02
CLCN4P51793 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.42■■□□□ 1.02
CLCN4P51793 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.42■■□□□ 1.02
CLCN4P51793 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.42■■□□□ 1.02
CLCN4P51793 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLCN4P51793 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CLCN4P51793 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN4P51793 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CLCN4P51793 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN4P51793 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.41■■□□□ 1.02
CLCN4P51793 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CLCN4P51793 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN4P51793 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CLCN4P51793 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN4P51793 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN4P51793 AC087499.1-201ENST00000418141 1075 ntBASIC21.41■■□□□ 1.02
CLCN4P51793 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.41■■□□□ 1.02
CLCN4P51793 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CLCN4P51793 KRT18P21-201ENST00000515767 1272 ntBASIC21.41■■□□□ 1.02
CLCN4P51793 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN4P51793 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.41■■□□□ 1.02
CLCN4P51793 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.41■■□□□ 1.02
CLCN4P51793 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN4P51793 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN4P51793 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.41■■□□□ 1.02
CLCN4P51793 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN4P51793 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.41■■□□□ 1.02
CLCN4P51793 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLCN4P51793 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CLCN4P51793 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
CLCN4P51793 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
CLCN4P51793 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN4P51793 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN4P51793 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN4P51793 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN4P51793 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN4P51793 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN4P51793 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCN4P51793 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN4P51793 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.4■■□□□ 1.02
CLCN4P51793 AL355075.4-201ENST00000554988 638 ntBASIC21.4■■□□□ 1.02
CLCN4P51793 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.4■■□□□ 1.02
CLCN4P51793 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCN4P51793 AC010331.1-201ENST00000611423 582 ntBASIC21.4■■□□□ 1.02
CLCN4P51793 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.4■■□□□ 1.02
CLCN4P51793 AC133561.5-201ENST00000635547 218 ntBASIC21.4■■□□□ 1.02
CLCN4P51793 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN4P51793 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.4■■□□□ 1.02
CLCN4P51793 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN4P51793 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCN4P51793 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLCN4P51793 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CLCN4P51793 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
CLCN4P51793 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.39■■□□□ 1.01
CLCN4P51793 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN4P51793 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCN4P51793 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.39■■□□□ 1.01
CLCN4P51793 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CLCN4P51793 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCN4P51793 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCN4P51793 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CLCN4P51793 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCN4P51793 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN4P51793 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN4P51793 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN4P51793 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN4P51793 AC011484.1-201ENST00000377652 1995 ntBASIC21.39■■□□□ 1.01
CLCN4P51793 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN4P51793 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CLCN4P51793 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms