Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 YLR154C-HYLR154C-H 132 nt3.68□□□□□ -1.82
NUP42P49686 YLR156C-AYLR156C-A 132 nt3.68□□□□□ -1.82
NUP42P49686 YLR157C-CYLR157C-C 132 nt3.68□□□□□ -1.82
NUP42P49686 YLR159C-AYLR159C-A 132 nt3.68□□□□□ -1.82
NUP42P49686 GIS1YDR096W 2685 nt3.68□□□□□ -1.82
NUP42P49686 VAS1YGR094W 3315 nt3.67□□□□□ -1.82
NUP42P49686 COY1YKL179C 2040 nt3.67□□□□□ -1.82
NUP42P49686 EMP24YGL200C 612 nt3.67□□□□□ -1.82
NUP42P49686 YHL015W-AYHL015W-A 84 nt3.67□□□□□ -1.82
NUP42P49686 YHR071C-AYHR071C-A 321 nt3.67□□□□□ -1.82
NUP42P49686 YBR221W-AYBR221W-A 105 nt3.67□□□□□ -1.82
NUP42P49686 ZRG8YER033C 3231 nt3.67□□□□□ -1.82
NUP42P49686 ATG13YPR185W 2217 nt3.67□□□□□ -1.82
NUP42P49686 SPC98YNL126W 2541 nt3.67□□□□□ -1.82
NUP42P49686 SIR3YLR442C 2937 nt3.67□□□□□ -1.82
NUP42P49686 ROM1YGR070W 3468 nt3.67□□□□□ -1.82
NUP42P49686 ECM21YBL101C 3354 nt3.66□□□□□ -1.82
NUP42P49686 PEP5YMR231W 3090 nt3.66□□□□□ -1.82
NUP42P49686 BRP1YGL007W 378 nt3.66□□□□□ -1.82
NUP42P49686 RPL20AYMR242C 519 nt3.66□□□□□ -1.82
NUP42P49686 UTP14YML093W 2700 nt3.66□□□□□ -1.82
NUP42P49686 IRR1YIL026C 3453 nt3.65□□□□□ -1.82
NUP42P49686 RRP6YOR001W 2202 nt3.65□□□□□ -1.83
NUP42P49686 YIL071W-AYIL071W-A 477 nt3.65□□□□□ -1.83
NUP42P49686 YJL022WYJL022W 309 nt3.65□□□□□ -1.83
NUP42P49686 YJR112W-AYJR112W-A 330 nt3.65□□□□□ -1.83
NUP42P49686 SPO75YLL005C 2607 nt3.64□□□□□ -1.83
NUP42P49686 YKU80YMR106C 1890 nt3.64□□□□□ -1.83
NUP42P49686 SDC25YLL016W 3147 nt3.63□□□□□ -1.83
NUP42P49686 YOR102WYOR102W 351 nt3.63□□□□□ -1.83
NUP42P49686 XRS2YDR369C 2565 nt3.63□□□□□ -1.83
NUP42P49686 LYS14YDR034C 2373 nt3.63□□□□□ -1.83
NUP42P49686 SLM1YIL105C 2061 nt3.63□□□□□ -1.83
NUP42P49686 TFC8YPL007C 1767 nt3.62□□□□□ -1.83
NUP42P49686 YHR217CYHR217C 462 nt3.62□□□□□ -1.83
NUP42P49686 MAK21YDR060W 3078 nt3.62□□□□□ -1.83
NUP42P49686 SPO21YOL091W 1830 nt3.61□□□□□ -1.83
NUP42P49686 RPS25BYLR333C 327 nt3.61□□□□□ -1.83
NUP42P49686 YBR277CYBR277C 402 nt3.61□□□□□ -1.83
NUP42P49686 PKH1YDR490C 2301 nt3.61□□□□□ -1.83
NUP42P49686 FIR1YER032W 2631 nt3.6□□□□□ -1.83
NUP42P49686 RGA2YDR379W 3030 nt3.6□□□□□ -1.83
NUP42P49686 YDL196WYDL196W 330 nt3.6□□□□□ -1.83
NUP42P49686 ACB1YGR037C 264 nt3.6□□□□□ -1.83
NUP42P49686 YHL005CYHL005C 393 nt3.6□□□□□ -1.83
NUP42P49686 SNC1YAL030W 354 nt3.6□□□□□ -1.83
NUP42P49686 YOR318CYOR318C 306 nt3.6□□□□□ -1.83
NUP42P49686 STB4YMR019W 2850 nt3.6□□□□□ -1.83
NUP42P49686 INP53YOR109W 3324 nt3.59□□□□□ -1.83
NUP42P49686 YCR043CYCR043C 384 nt3.59□□□□□ -1.83
NUP42P49686 ACM1YPL267W 630 nt3.59□□□□□ -1.83
NUP42P49686 MNE1YOR350C 1992 nt3.59□□□□□ -1.83
NUP42P49686 FIG4YNL325C 2640 nt3.58□□□□□ -1.84
NUP42P49686 SPO22YIL073C 2928 nt3.58□□□□□ -1.84
NUP42P49686 SMY2YBR172C 2223 nt3.58□□□□□ -1.84
NUP42P49686 YGR067CYGR067C 2415 nt3.58□□□□□ -1.84
NUP42P49686 YKL165C-AYKL165C-A 234 nt3.58□□□□□ -1.84
NUP42P49686 MIT1YEL007W 2001 nt3.58□□□□□ -1.84
NUP42P49686 SET2YJL168C 2202 nt3.58□□□□□ -1.84
NUP42P49686 CHD1YER164W 4407 nt3.57□□□□□ -1.84
NUP42P49686 YJL120WYJL120W 324 nt3.57□□□□□ -1.84
NUP42P49686 YLL019W-AYLL019W-A 93 nt3.57□□□□□ -1.84
NUP42P49686 AIM44YPL158C 2277 nt3.57□□□□□ -1.84
NUP42P49686 PUT3YKL015W 2940 nt3.57□□□□□ -1.84
NUP42P49686 YDR545C-AYDR545C-A 480 nt3.56□□□□□ -1.84
NUP42P49686 PHD1YKL043W 1101 nt3.56□□□□□ -1.84
NUP42P49686 HAL9YOL089C 3093 nt3.56□□□□□ -1.84
NUP42P49686 ZRG17YNR039C 1818 nt3.56□□□□□ -1.84
NUP42P49686 YCF1YDR135C 4548 nt3.56□□□□□ -1.84
NUP42P49686 YIL080WYIL080W 4722 nt3.55□□□□□ -1.84
NUP42P49686 YHR032W-AYHR032W-A 180 nt3.55□□□□□ -1.84
NUP42P49686 RCY1YJL204C 2523 nt3.55□□□□□ -1.84
NUP42P49686 VTC3YPL019C 2508 nt3.55□□□□□ -1.84
NUP42P49686 TAF5YBR198C 2397 nt3.54□□□□□ -1.84
NUP42P49686 MET6YER091C 2304 nt3.54□□□□□ -1.84
NUP42P49686 TCB3YML072C 4638 nt3.54□□□□□ -1.84
NUP42P49686 MGM1YOR211C 2646 nt3.54□□□□□ -1.84
NUP42P49686 RLM1YPL089C 2031 nt3.53□□□□□ -1.84
NUP42P49686 SSN2YDR443C 4263 nt3.53□□□□□ -1.84
NUP42P49686 YOR108C-AYOR108C-A 210 nt3.53□□□□□ -1.84
NUP42P49686 RPS17AYML024W 411 nt3.52□□□□□ -1.85
NUP42P49686 CDC53YDL132W 2448 nt3.52□□□□□ -1.85
NUP42P49686 snR7-SsnR7-S 179 nt3.51□□□□□ -1.85
NUP42P49686 PMP2YEL017C-A 132 nt3.51□□□□□ -1.85
NUP42P49686 YER039C-AYER039C-A 219 nt3.51□□□□□ -1.85
NUP42P49686 RPL6AYML073C 531 nt3.51□□□□□ -1.85
NUP42P49686 YDR341CYDR341C 1824 nt3.51□□□□□ -1.85
NUP42P49686 MET4YNL103W 2019 nt3.51□□□□□ -1.85
NUP42P49686 PIP2YOR363C 2991 nt3.51□□□□□ -1.85
NUP42P49686 PAU8YAL068C 363 nt3.5□□□□□ -1.85
NUP42P49686 PAU18YLL064C 363 nt3.5□□□□□ -1.85
NUP42P49686 PAU6YNR076W 363 nt3.5□□□□□ -1.85
NUP42P49686 PAU20YOL161C 363 nt3.5□□□□□ -1.85
NUP42P49686 YPL278CYPL278C 303 nt3.5□□□□□ -1.85
NUP42P49686 CHS2YBR038W 2892 nt3.5□□□□□ -1.85
NUP42P49686 EDS1YBR033W 2760 nt3.5□□□□□ -1.85
NUP42P49686 LRG1YDL240W 3054 nt3.49□□□□□ -1.85
NUP42P49686 YPR170W-BYPR170W-B 258 nt3.49□□□□□ -1.85
NUP42P49686 SAS3YBL052C 2496 nt3.49□□□□□ -1.85
NUP42P49686 SBE22YHR103W 2559 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 38.3 ms