Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
UBE2AP49459 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC12.82□□□□□ -0.36
UBE2AP49459 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
UBE2AP49459 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UBE2AP49459 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 AC073130.3-201ENST00000624389 2278 ntBASIC12.82□□□□□ -0.36
UBE2AP49459 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
UBE2AP49459 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
UBE2AP49459 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2AP49459 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UBE2AP49459 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UBE2AP49459 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2AP49459 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UBE2AP49459 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2AP49459 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC12.81□□□□□ -0.36
UBE2AP49459 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC12.81□□□□□ -0.36
UBE2AP49459 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2AP49459 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
UBE2AP49459 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2AP49459 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC12.81□□□□□ -0.36
UBE2AP49459 COX20-201ENST00000366528 568 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2AP49459 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC12.81□□□□□ -0.36
UBE2AP49459 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC12.81□□□□□ -0.36
UBE2AP49459 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC12.81□□□□□ -0.36
UBE2AP49459 AC138907.5-202ENST00000569484 235 ntBASIC12.81□□□□□ -0.36
UBE2AP49459 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 SP2-202ENST00000613139 908 ntTSL 5 BASIC12.81□□□□□ -0.36
UBE2AP49459 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UBE2AP49459 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2AP49459 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UBE2AP49459 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2AP49459 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UBE2AP49459 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
UBE2AP49459 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
UBE2AP49459 AL157384.1-201ENST00000445995 2473 ntBASIC12.8□□□□□ -0.36
UBE2AP49459 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2AP49459 GUK1-205ENST00000366722 850 ntTSL 3 BASIC12.8□□□□□ -0.36
UBE2AP49459 JTB-203ENST00000368589 1216 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2AP49459 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2AP49459 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2AP49459 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2AP49459 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC12.8□□□□□ -0.36
UBE2AP49459 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2AP49459 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 KRT16P2-201ENST00000414673 1423 ntBASIC12.79□□□□□ -0.36
UBE2AP49459 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
UBE2AP49459 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC12.79□□□□□ -0.36
UBE2AP49459 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2AP49459 AC010141.2-201ENST00000452426 721 ntBASIC12.79□□□□□ -0.36
UBE2AP49459 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms