Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP9P49458 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SRP9P49458 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SRP9P49458 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.92■□□□□ 0.46
SRP9P49458 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.92■□□□□ 0.46
SRP9P49458 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP9P49458 AC138907.5-202ENST00000569484 235 ntBASIC17.92■□□□□ 0.46
SRP9P49458 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SRP9P49458 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP9P49458 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.92■□□□□ 0.46
SRP9P49458 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP9P49458 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP9P49458 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRP9P49458 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRP9P49458 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.92■□□□□ 0.46
SRP9P49458 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP9P49458 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRP9P49458 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.91■□□□□ 0.46
SRP9P49458 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SRP9P49458 AC116562.4-201ENST00000641316 2276 ntBASIC17.91■□□□□ 0.46
SRP9P49458 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SRP9P49458 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SRP9P49458 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.91■□□□□ 0.46
SRP9P49458 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.91■□□□□ 0.46
SRP9P49458 AC120498.10-201ENST00000621827 505 ntBASIC17.91■□□□□ 0.46
SRP9P49458 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.91■□□□□ 0.46
SRP9P49458 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRP9P49458 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.9■□□□□ 0.46
SRP9P49458 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.9■□□□□ 0.46
SRP9P49458 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SRP9P49458 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SRP9P49458 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SRP9P49458 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SRP9P49458 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 AL162377.1-201ENST00000618844 1793 ntBASIC17.9■□□□□ 0.46
SRP9P49458 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SRP9P49458 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.9■□□□□ 0.46
SRP9P49458 AP001160.3-201ENST00000601484 763 ntBASIC17.9■□□□□ 0.46
SRP9P49458 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SRP9P49458 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 AC099778.1-201ENST00000568593 1911 ntBASIC17.9■□□□□ 0.46
SRP9P49458 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRP9P49458 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.89■□□□□ 0.46
SRP9P49458 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SRP9P49458 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRP9P49458 AC007225.1-201ENST00000566331 1836 ntBASIC17.89■□□□□ 0.45
SRP9P49458 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP9P49458 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP9P49458 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP9P49458 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP9P49458 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRP9P49458 POU5F1P4-201ENST00000413175 1085 ntBASIC17.89■□□□□ 0.45
SRP9P49458 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.89■□□□□ 0.45
SRP9P49458 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.89■□□□□ 0.45
SRP9P49458 AC010141.2-201ENST00000452426 721 ntBASIC17.89■□□□□ 0.45
SRP9P49458 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.89■□□□□ 0.45
SRP9P49458 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.89■□□□□ 0.45
SRP9P49458 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
SRP9P49458 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP9P49458 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRP9P49458 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP9P49458 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.89■□□□□ 0.45
SRP9P49458 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP9P49458 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRP9P49458 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SRP9P49458 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.88■□□□□ 0.45
SRP9P49458 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SRP9P49458 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.88■□□□□ 0.45
SRP9P49458 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.88■□□□□ 0.45
SRP9P49458 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP9P49458 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SRP9P49458 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.88■□□□□ 0.45
SRP9P49458 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SRP9P49458 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms