Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA4P48169 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.27■□□□□ 0.68
GABRA4P48169 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.27■□□□□ 0.68
GABRA4P48169 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
GABRA4P48169 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.27■□□□□ 0.68
GABRA4P48169 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.27■□□□□ 0.68
GABRA4P48169 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
GABRA4P48169 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA4P48169 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA4P48169 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.27■□□□□ 0.67
GABRA4P48169 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GABRA4P48169 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA4P48169 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA4P48169 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA4P48169 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA4P48169 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GABRA4P48169 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GABRA4P48169 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA4P48169 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GABRA4P48169 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA4P48169 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA4P48169 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA4P48169 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA4P48169 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GABRA4P48169 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GABRA4P48169 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.26■□□□□ 0.67
GABRA4P48169 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.26■□□□□ 0.67
GABRA4P48169 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.26■□□□□ 0.67
GABRA4P48169 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA4P48169 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GABRA4P48169 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GABRA4P48169 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GABRA4P48169 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.25■□□□□ 0.67
GABRA4P48169 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
GABRA4P48169 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.25■□□□□ 0.67
GABRA4P48169 AC233263.1-201ENST00000578059 224 ntBASIC19.25■□□□□ 0.67
GABRA4P48169 AC006557.6-201ENST00000623071 864 ntBASIC19.25■□□□□ 0.67
GABRA4P48169 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 AC007225.1-201ENST00000566331 1836 ntBASIC19.25■□□□□ 0.67
GABRA4P48169 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
GABRA4P48169 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.25■□□□□ 0.67
GABRA4P48169 PTBP1P-201ENST00000554374 1601 ntBASIC19.25■□□□□ 0.67
GABRA4P48169 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
GABRA4P48169 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GABRA4P48169 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.25■□□□□ 0.67
GABRA4P48169 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GABRA4P48169 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 FP700111.2-201ENST00000619190 1892 ntBASIC19.24■□□□□ 0.67
GABRA4P48169 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.24■□□□□ 0.67
GABRA4P48169 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.24■□□□□ 0.67
GABRA4P48169 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 AC023632.3-201ENST00000521633 145 ntBASIC19.24■□□□□ 0.67
GABRA4P48169 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GABRA4P48169 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.24■□□□□ 0.67
GABRA4P48169 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GABRA4P48169 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.24■□□□□ 0.67
GABRA4P48169 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABRA4P48169 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.24■□□□□ 0.67
GABRA4P48169 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.24■□□□□ 0.67
GABRA4P48169 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.23■□□□□ 0.67
GABRA4P48169 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.23■□□□□ 0.67
GABRA4P48169 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
GABRA4P48169 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA4P48169 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.23■□□□□ 0.67
GABRA4P48169 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GABRA4P48169 POM121L13P-201ENST00000422362 380 ntBASIC19.23■□□□□ 0.67
GABRA4P48169 GCSHP5-201ENST00000443090 522 ntBASIC19.23■□□□□ 0.67
GABRA4P48169 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA4P48169 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.23■□□□□ 0.67
GABRA4P48169 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.23■□□□□ 0.67
GABRA4P48169 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.23■□□□□ 0.67
GABRA4P48169 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.23■□□□□ 0.67
GABRA4P48169 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.23■□□□□ 0.67
GABRA4P48169 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.23■□□□□ 0.67
GABRA4P48169 AC120498.8-201ENST00000614275 531 ntBASIC19.23■□□□□ 0.67
GABRA4P48169 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA4P48169 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.23■□□□□ 0.67
GABRA4P48169 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA4P48169 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABRA4P48169 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms