Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 TFC4YGR047C 3078 nt3.13□□□□□ -1.91
VPS53P47061 DBP7YKR024C 2229 nt3.13□□□□□ -1.91
VPS53P47061 YER189WYER189W 369 nt3.13□□□□□ -1.91
VPS53P47061 PMR1YGL167C 2853 nt3.13□□□□□ -1.91
VPS53P47061 POM152YMR129W 4014 nt3.13□□□□□ -1.91
VPS53P47061 UPS1YLR193C 528 nt3.12□□□□□ -1.91
VPS53P47061 RPL38YLR325C 237 nt3.12□□□□□ -1.91
VPS53P47061 YLR342W-AYLR342W-A 174 nt3.12□□□□□ -1.91
VPS53P47061 LSM7YNL147W 348 nt3.12□□□□□ -1.91
VPS53P47061 KAP104YBR017C 2757 nt3.12□□□□□ -1.91
VPS53P47061 ESL1YIL151C 3357 nt3.12□□□□□ -1.91
VPS53P47061 YGR250CYGR250C 2346 nt3.11□□□□□ -1.91
VPS53P47061 SAK1YER129W 3429 nt3.11□□□□□ -1.91
VPS53P47061 MPH1YIR002C 2982 nt3.11□□□□□ -1.91
VPS53P47061 PSK2YOL045W 3306 nt3.11□□□□□ -1.91
VPS53P47061 INP52YNL106C 3552 nt3.11□□□□□ -1.91
VPS53P47061 DOT6YER088C 2013 nt3.1□□□□□ -1.91
VPS53P47061 PRP39YML046W 1890 nt3.1□□□□□ -1.91
VPS53P47061 YOR015WYOR015W 360 nt3.1□□□□□ -1.91
VPS53P47061 TRM2YKR056W 1920 nt3.1□□□□□ -1.91
VPS53P47061 HDA3YPR179C 1968 nt3.1□□□□□ -1.91
VPS53P47061 SOK1YDR006C 2706 nt3.1□□□□□ -1.91
VPS53P47061 VIK1YPL253C 1944 nt3.09□□□□□ -1.91
VPS53P47061 TCB2YNL087W 3537 nt3.09□□□□□ -1.91
VPS53P47061 GRX8YLR364W 330 nt3.09□□□□□ -1.91
VPS53P47061 YML037CYML037C 1023 nt3.09□□□□□ -1.91
VPS53P47061 RPL20AYMR242C 519 nt3.09□□□□□ -1.91
VPS53P47061 RGR1YLR071C 3249 nt3.09□□□□□ -1.92
VPS53P47061 SNU114YKL173W 3027 nt3.09□□□□□ -1.92
VPS53P47061 BPT1YLL015W 4680 nt3.08□□□□□ -1.92
VPS53P47061 PRE4YFR050C 801 nt3.08□□□□□ -1.92
VPS53P47061 YGL014C-AYGL014C-A 162 nt3.08□□□□□ -1.92
VPS53P47061 YLR120W-AYLR120W-A 102 nt3.08□□□□□ -1.92
VPS53P47061 YMR321CYMR321C 318 nt3.08□□□□□ -1.92
VPS53P47061 YNL028WYNL028W 318 nt3.08□□□□□ -1.92
VPS53P47061 RPL33AYPL143W 324 nt3.08□□□□□ -1.92
VPS53P47061 DFG16YOR030W 1860 nt3.07□□□□□ -1.92
VPS53P47061 PAN3YKL025C 2040 nt3.07□□□□□ -1.92
VPS53P47061 YDL025W-AYDL025W-A 105 nt3.07□□□□□ -1.92
VPS53P47061 tW(CCA)G1tW(CCA)G1 72 nt3.07□□□□□ -1.92
VPS53P47061 tW(CCA)G2tW(CCA)G2 72 nt3.07□□□□□ -1.92
VPS53P47061 tW(CCA)JtW(CCA)J 72 nt3.07□□□□□ -1.92
VPS53P47061 tW(CCA)KtW(CCA)K 72 nt3.07□□□□□ -1.92
VPS53P47061 tW(CCA)MtW(CCA)M 72 nt3.07□□□□□ -1.92
VPS53P47061 tW(CCA)PtW(CCA)P 72 nt3.07□□□□□ -1.92
VPS53P47061 RGM1YMR182C 636 nt3.07□□□□□ -1.92
VPS53P47061 PDR3YBL005W 2931 nt3.07□□□□□ -1.92
VPS53P47061 GUP1YGL084C 1683 nt3.07□□□□□ -1.92
VPS53P47061 PNC1YGL037C 651 nt3.06□□□□□ -1.92
VPS53P47061 PCC1YKR095W-A 267 nt3.06□□□□□ -1.92
VPS53P47061 YML007C-AYML007C-A 111 nt3.06□□□□□ -1.92
VPS53P47061 CSE2YNR010W 450 nt3.06□□□□□ -1.92
VPS53P47061 NAB3YPL190C 2409 nt3.06□□□□□ -1.92
VPS53P47061 snR43snR43 209 nt3.06□□□□□ -1.92
VPS53P47061 NET1YJL076W 3570 nt3.06□□□□□ -1.92
VPS53P47061 FKS3YMR306W 5358 nt3.05□□□□□ -1.92
VPS53P47061 YPL216WYPL216W 3309 nt3.05□□□□□ -1.92
VPS53P47061 SGD1YLR336C 2700 nt3.05□□□□□ -1.92
VPS53P47061 PSY2YNL201C 2577 nt3.05□□□□□ -1.92
VPS53P47061 YEL014CYEL014C 306 nt3.05□□□□□ -1.92
VPS53P47061 YJL135WYJL135W 318 nt3.05□□□□□ -1.92
VPS53P47061 VPS55YJR044C 423 nt3.05□□□□□ -1.92
VPS53P47061 YMR194C-AYMR194C-A 225 nt3.05□□□□□ -1.92
VPS53P47061 NUT2YPR168W 474 nt3.05□□□□□ -1.92
VPS53P47061 AI2Q0055 2565 nt3.05□□□□□ -1.92
VPS53P47061 SDH6YDR379C-A 240 nt3.04□□□□□ -1.92
VPS53P47061 YDR426CYDR426C 378 nt3.04□□□□□ -1.92
VPS53P47061 YLR140WYLR140W 327 nt3.04□□□□□ -1.92
VPS53P47061 YLR255CYLR255C 354 nt3.04□□□□□ -1.92
VPS53P47061 FPR1YNL135C 345 nt3.04□□□□□ -1.92
VPS53P47061 AI5_ALPHAQ0070 1893 nt3.04□□□□□ -1.92
VPS53P47061 YKU70YMR284W 1809 nt3.04□□□□□ -1.92
VPS53P47061 TOF2YKR010C 2316 nt3.04□□□□□ -1.92
VPS53P47061 VPS35YJL154C 2835 nt3.03□□□□□ -1.92
VPS53P47061 TMN3YER113C 2121 nt3.03□□□□□ -1.92
VPS53P47061 TSC11YER093C 4293 nt3.03□□□□□ -1.92
VPS53P47061 REV3YPL167C 4515 nt3.02□□□□□ -1.93
VPS53P47061 ALK2YBL009W 2031 nt3.02□□□□□ -1.93
VPS53P47061 OLI1Q0130 231 nt3.02□□□□□ -1.93
VPS53P47061 LCD1YDR499W 2244 nt3.02□□□□□ -1.93
VPS53P47061 BAS1YKR099W 2436 nt3.02□□□□□ -1.93
VPS53P47061 snR76snR76 109 nt3.01□□□□□ -1.93
VPS53P47061 YNL205CYNL205C 423 nt3.01□□□□□ -1.93
VPS53P47061 FRE2YKL220C 2136 nt3.01□□□□□ -1.93
VPS53P47061 PFF1YBR074W 2931 nt3□□□□□ -1.93
VPS53P47061 YBT1YLL048C 4986 nt3□□□□□ -1.93
VPS53P47061 RAX2YLR084C 3663 nt3□□□□□ -1.93
VPS53P47061 SRB8YCR081W 4284 nt3□□□□□ -1.93
VPS53P47061 SSS1YDR086C 243 nt3□□□□□ -1.93
VPS53P47061 INA22YIR024C 651 nt3□□□□□ -1.93
VPS53P47061 TRX1YLR043C 312 nt3□□□□□ -1.93
VPS53P47061 HSC82YMR186W 2118 nt3□□□□□ -1.93
VPS53P47061 YOR333CYOR333C 417 nt3□□□□□ -1.93
VPS53P47061 NEW1YPL226W 3591 nt3□□□□□ -1.93
VPS53P47061 RSN1YMR266W 2862 nt2.99□□□□□ -1.93
VPS53P47061 YBR224WYBR224W 516 nt2.99□□□□□ -1.93
VPS53P47061 UBP11YKR098C 2154 nt2.99□□□□□ -1.93
VPS53P47061 YGR067CYGR067C 2415 nt2.99□□□□□ -1.93
VPS53P47061 PTC5YOR090C 1719 nt2.99□□□□□ -1.93
VPS53P47061 DNL4YOR005C 2835 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 62.6 ms