Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.65■■□□□ 1.06
BRCC3P46736 FAM197Y4-202ENST00000622692 608 ntBASIC21.65■■□□□ 1.06
BRCC3P46736 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.65■■□□□ 1.06
BRCC3P46736 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRCC3P46736 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.64■■□□□ 1.06
BRCC3P46736 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
BRCC3P46736 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BRCC3P46736 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BRCC3P46736 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BRCC3P46736 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRCC3P46736 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
BRCC3P46736 AL390719.1-204ENST00000412397 1219 ntBASIC21.64■■□□□ 1.05
BRCC3P46736 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.64■■□□□ 1.05
BRCC3P46736 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.64■■□□□ 1.05
BRCC3P46736 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.64■■□□□ 1.05
BRCC3P46736 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BRCC3P46736 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.64■■□□□ 1.05
BRCC3P46736 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.64■■□□□ 1.05
BRCC3P46736 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.64■■□□□ 1.05
BRCC3P46736 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BRCC3P46736 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BRCC3P46736 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.63■■□□□ 1.05
BRCC3P46736 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.63■■□□□ 1.05
BRCC3P46736 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRCC3P46736 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
BRCC3P46736 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRCC3P46736 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRCC3P46736 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRCC3P46736 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.63■■□□□ 1.05
BRCC3P46736 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.63■■□□□ 1.05
BRCC3P46736 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRCC3P46736 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRCC3P46736 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.63■■□□□ 1.05
BRCC3P46736 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRCC3P46736 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
BRCC3P46736 AL121603.2-201ENST00000557373 2117 ntBASIC21.63■■□□□ 1.05
BRCC3P46736 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRCC3P46736 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.63■■□□□ 1.05
BRCC3P46736 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
BRCC3P46736 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.63■■□□□ 1.05
BRCC3P46736 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRCC3P46736 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.63■■□□□ 1.05
BRCC3P46736 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRCC3P46736 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRCC3P46736 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRCC3P46736 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.62■■□□□ 1.05
BRCC3P46736 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.62■■□□□ 1.05
BRCC3P46736 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
BRCC3P46736 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.62■■□□□ 1.05
BRCC3P46736 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
BRCC3P46736 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.62■■□□□ 1.05
BRCC3P46736 UBE2SP1-201ENST00000450587 669 ntBASIC21.62■■□□□ 1.05
BRCC3P46736 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.62■■□□□ 1.05
BRCC3P46736 RPS2P4-201ENST00000476944 856 ntBASIC21.62■■□□□ 1.05
BRCC3P46736 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.62■■□□□ 1.05
BRCC3P46736 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.62■■□□□ 1.05
BRCC3P46736 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.62■■□□□ 1.05
BRCC3P46736 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRCC3P46736 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRCC3P46736 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRCC3P46736 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.61■■□□□ 1.05
BRCC3P46736 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRCC3P46736 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.61■■□□□ 1.05
BRCC3P46736 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
BRCC3P46736 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRCC3P46736 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRCC3P46736 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRCC3P46736 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
BRCC3P46736 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRCC3P46736 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
BRCC3P46736 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRCC3P46736 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
BRCC3P46736 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.61■■□□□ 1.05
BRCC3P46736 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.61■■□□□ 1.05
BRCC3P46736 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRCC3P46736 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
BRCC3P46736 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRCC3P46736 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRCC3P46736 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRCC3P46736 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRCC3P46736 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.6■■□□□ 1.05
BRCC3P46736 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRCC3P46736 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRCC3P46736 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRCC3P46736 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.6■■□□□ 1.05
BRCC3P46736 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRCC3P46736 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
BRCC3P46736 AL596275.1-201ENST00000423464 877 ntBASIC21.6■■□□□ 1.05
BRCC3P46736 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.6■■□□□ 1.05
BRCC3P46736 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.6■■□□□ 1.05
BRCC3P46736 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.6■■□□□ 1.05
BRCC3P46736 AC008550.1-201ENST00000511500 884 ntBASIC21.6■■□□□ 1.05
BRCC3P46736 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.6■■□□□ 1.05
BRCC3P46736 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.6■■□□□ 1.05
BRCC3P46736 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.6■■□□□ 1.05
BRCC3P46736 MTDHP1-201ENST00000605323 784 ntBASIC21.6■■□□□ 1.05
BRCC3P46736 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRCC3P46736 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
BRCC3P46736 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRCC3P46736 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms