Protein–RNA interactions for Protein: P40486

SHQ1, Protein SHQ1, yeastyeast

Predicted RBP Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHQ1P40486 SMY1YKL079W 1971 nt1.5□□□□□ -2.17
SHQ1P40486 YDR210W-AYDR210W-A 1317 nt1.49□□□□□ -2.17
SHQ1P40486 VPS52YDR484W 1926 nt1.49□□□□□ -2.17
SHQ1P40486 YEL018C-AYEL018C-A 534 nt1.49□□□□□ -2.17
SHQ1P40486 TIF11YMR260C 462 nt1.49□□□□□ -2.17
SHQ1P40486 MON2YNL297C 4911 nt1.48□□□□□ -2.17
SHQ1P40486 YSW1YBR148W 1830 nt1.48□□□□□ -2.17
SHQ1P40486 FRK1YPL141C 2598 nt1.48□□□□□ -2.17
SHQ1P40486 YCR043CYCR043C 384 nt1.48□□□□□ -2.17
SHQ1P40486 SMB1YER029C 591 nt1.48□□□□□ -2.17
SHQ1P40486 ILM1YJR118C 612 nt1.48□□□□□ -2.17
SHQ1P40486 YJR141WYJR141W 1044 nt1.48□□□□□ -2.17
SHQ1P40486 PEP3YLR148W 2757 nt1.48□□□□□ -2.17
SHQ1P40486 SPC110YDR356W 2835 nt1.48□□□□□ -2.17
SHQ1P40486 MSS11YMR164C 2277 nt1.47□□□□□ -2.17
SHQ1P40486 snR79snR79 84 nt1.47□□□□□ -2.17
SHQ1P40486 RPC10YHR143W-A 213 nt1.47□□□□□ -2.17
SHQ1P40486 YGR130CYGR130C 2451 nt1.47□□□□□ -2.17
SHQ1P40486 HIR3YJR140C 4947 nt1.47□□□□□ -2.17
SHQ1P40486 SPR3YGR059W 1539 nt1.46□□□□□ -2.18
SHQ1P40486 YLR419WYLR419W 4308 nt1.46□□□□□ -2.18
SHQ1P40486 SNU56YDR240C 1479 nt1.46□□□□□ -2.18
SHQ1P40486 YDL041WYDL041W 354 nt1.46□□□□□ -2.18
SHQ1P40486 EMC4YGL231C 573 nt1.46□□□□□ -2.18
SHQ1P40486 SVS1YPL163C 783 nt1.46□□□□□ -2.18
SHQ1P40486 YGR250CYGR250C 2346 nt1.46□□□□□ -2.18
SHQ1P40486 HMI1YOL095C 2121 nt1.46□□□□□ -2.18
SHQ1P40486 FYV8YGR196C 2454 nt1.46□□□□□ -2.18
SHQ1P40486 ASM4YDL088C 1587 nt1.46□□□□□ -2.18
SHQ1P40486 BST1YFL025C 3090 nt1.45□□□□□ -2.18
SHQ1P40486 MET32YDR253C 576 nt1.45□□□□□ -2.18
SHQ1P40486 YHR214W-AYHR214W-A 486 nt1.45□□□□□ -2.18
SHQ1P40486 YJR079WYJR079W 330 nt1.45□□□□□ -2.18
SHQ1P40486 MCM22YJR135C 720 nt1.45□□□□□ -2.18
SHQ1P40486 YKL044WYKL044W 321 nt1.45□□□□□ -2.18
SHQ1P40486 YAR068WYAR068W 486 nt1.45□□□□□ -2.18
SHQ1P40486 PHR1YOR386W 1698 nt1.45□□□□□ -2.18
SHQ1P40486 CTR9YOL145C 3234 nt1.44□□□□□ -2.18
SHQ1P40486 CDC25YLR310C 4770 nt1.44□□□□□ -2.18
SHQ1P40486 YHR214C-CYHR214C-C 1437 nt1.44□□□□□ -2.18
SHQ1P40486 PKR1YMR123W 369 nt1.44□□□□□ -2.18
SHQ1P40486 RCN2YOR220W 798 nt1.44□□□□□ -2.18
SHQ1P40486 IRC16YPR038W 360 nt1.44□□□□□ -2.18
SHQ1P40486 SPC98YNL126W 2541 nt1.44□□□□□ -2.18
SHQ1P40486 POL5YEL055C 3069 nt1.44□□□□□ -2.18
SHQ1P40486 YBR184WYBR184W 1572 nt1.43□□□□□ -2.18
SHQ1P40486 tH(GUG)E1tH(GUG)E1 72 nt1.43□□□□□ -2.18
SHQ1P40486 tH(GUG)E2tH(GUG)E2 72 nt1.43□□□□□ -2.18
SHQ1P40486 tH(GUG)G1tH(GUG)G1 72 nt1.43□□□□□ -2.18
SHQ1P40486 tH(GUG)G2tH(GUG)G2 72 nt1.43□□□□□ -2.18
SHQ1P40486 tH(GUG)HtH(GUG)H 72 nt1.43□□□□□ -2.18
SHQ1P40486 tH(GUG)KtH(GUG)K 72 nt1.43□□□□□ -2.18
SHQ1P40486 tH(GUG)MtH(GUG)M 72 nt1.43□□□□□ -2.18
SHQ1P40486 YER088C-AYER088C-A 324 nt1.43□□□□□ -2.18
SHQ1P40486 YER188C-AYER188C-A 300 nt1.43□□□□□ -2.18
SHQ1P40486 CIC1YHR052W 1131 nt1.43□□□□□ -2.18
SHQ1P40486 YKL068W-AYKL068W-A 237 nt1.43□□□□□ -2.18
SHQ1P40486 YKL183C-AYKL183C-A 213 nt1.43□□□□□ -2.18
SHQ1P40486 SWT1YOR166C 1377 nt1.43□□□□□ -2.18
SHQ1P40486 AHC1YOR023C 1701 nt1.43□□□□□ -2.18
SHQ1P40486 PPN1YDR452W 2025 nt1.42□□□□□ -2.18
SHQ1P40486 CRG1YHR209W 876 nt1.42□□□□□ -2.18
SHQ1P40486 NOP15YNL110C 663 nt1.42□□□□□ -2.18
SHQ1P40486 SLM6YBR266C 453 nt1.42□□□□□ -2.18
SHQ1P40486 PIK1YNL267W 3201 nt1.42□□□□□ -2.18
SHQ1P40486 MSC6YOR354C 2079 nt1.41□□□□□ -2.18
SHQ1P40486 CGI121YML036W 546 nt1.41□□□□□ -2.18
SHQ1P40486 PET123YOR158W 957 nt1.41□□□□□ -2.18
SHQ1P40486 YBR071WYBR071W 636 nt1.41□□□□□ -2.18
SHQ1P40486 YBR012W-AYBR012W-A 1323 nt1.4□□□□□ -2.18
SHQ1P40486 YOR142W-AYOR142W-A 1323 nt1.4□□□□□ -2.18
SHQ1P40486 YPR158W-AYPR158W-A 1323 nt1.4□□□□□ -2.18
SHQ1P40486 RLM1YPL089C 2031 nt1.4□□□□□ -2.18
SHQ1P40486 PIP2YOR363C 2991 nt1.4□□□□□ -2.19
SHQ1P40486 LAA1YJL207C 6045 nt1.4□□□□□ -2.19
SHQ1P40486 YML003WYML003W 873 nt1.4□□□□□ -2.19
SHQ1P40486 YER121WYER121W 345 nt1.39□□□□□ -2.19
SHQ1P40486 YLR140WYLR140W 327 nt1.39□□□□□ -2.19
SHQ1P40486 YNL303WYNL303W 348 nt1.39□□□□□ -2.19
SHQ1P40486 snR189snR189 189 nt1.39□□□□□ -2.19
SHQ1P40486 YGR109W-BYGR109W-B 4644 nt1.38□□□□□ -2.19
SHQ1P40486 APQ13YJL075C 417 nt1.38□□□□□ -2.19
SHQ1P40486 EAF6YJR082C 342 nt1.38□□□□□ -2.19
SHQ1P40486 FMP23YBR047W 528 nt1.38□□□□□ -2.19
SHQ1P40486 YPR146CYPR146C 330 nt1.38□□□□□ -2.19
SHQ1P40486 SEC21YNL287W 2808 nt1.38□□□□□ -2.19
SHQ1P40486 IML1YJR138W 4755 nt1.38□□□□□ -2.19
SHQ1P40486 SEF1YBL066C 3447 nt1.37□□□□□ -2.19
SHQ1P40486 MAD1YGL086W 2250 nt1.37□□□□□ -2.19
SHQ1P40486 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
SHQ1P40486 YNL284C-BYNL284C-B 5268 nt1.37□□□□□ -2.19
SHQ1P40486 RPL42BYHR141C 321 nt1.37□□□□□ -2.19
SHQ1P40486 DDR48YMR173W 1293 nt1.37□□□□□ -2.19
SHQ1P40486 GPI15YNL038W 690 nt1.37□□□□□ -2.19
SHQ1P40486 RPL42AYNL162W 321 nt1.37□□□□□ -2.19
SHQ1P40486 NCA2YPR155C 1851 nt1.37□□□□□ -2.19
SHQ1P40486 SHE9YDR393W 1371 nt1.36□□□□□ -2.19
SHQ1P40486 RPL9AYGL147C 576 nt1.36□□□□□ -2.19
SHQ1P40486 YJL015CYJL015C 285 nt1.36□□□□□ -2.19
SHQ1P40486 STE18YJR086W 333 nt1.36□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 34.7 ms