Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 CDC50YCR094W 1176 nt2.48□□□□□ -2.01
VPS27P40343 DAD4YDR320C-A 219 nt2.48□□□□□ -2.01
VPS27P40343 YBL012CYBL012C 402 nt2.48□□□□□ -2.01
VPS27P40343 YOR146WYOR146W 306 nt2.48□□□□□ -2.01
VPS27P40343 YOR392WYOR392W 444 nt2.48□□□□□ -2.01
VPS27P40343 COS111YBR203W 2775 nt2.48□□□□□ -2.01
VPS27P40343 NOP14YDL148C 2433 nt2.48□□□□□ -2.01
VPS27P40343 VPS8YAL002W 3825 nt2.47□□□□□ -2.01
VPS27P40343 SET2YJL168C 2202 nt2.47□□□□□ -2.01
VPS27P40343 MSS11YMR164C 2277 nt2.47□□□□□ -2.01
VPS27P40343 YDR250CYDR250C 276 nt2.46□□□□□ -2.02
VPS27P40343 RTT102YGR275W 474 nt2.46□□□□□ -2.02
VPS27P40343 YHL046W-AYHL046W-A 327 nt2.46□□□□□ -2.02
VPS27P40343 YPR146CYPR146C 330 nt2.46□□□□□ -2.02
VPS27P40343 MNE1YOR350C 1992 nt2.46□□□□□ -2.02
VPS27P40343 KAP123YER110C 3342 nt2.46□□□□□ -2.02
VPS27P40343 BUD2YKL092C 3315 nt2.46□□□□□ -2.02
VPS27P40343 SGD1YLR336C 2700 nt2.46□□□□□ -2.02
VPS27P40343 STB4YMR019W 2850 nt2.45□□□□□ -2.02
VPS27P40343 YDR286CYDR286C 345 nt2.45□□□□□ -2.02
VPS27P40343 YGL024WYGL024W 336 nt2.45□□□□□ -2.02
VPS27P40343 IRA2YOL081W 9240 nt2.44□□□□□ -2.02
VPS27P40343 QCR7YDR529C 384 nt2.44□□□□□ -2.02
VPS27P40343 tR(ACG)Q2tR(ACG)Q2 74 nt2.44□□□□□ -2.02
VPS27P40343 YHR175W-AYHR175W-A 150 nt2.44□□□□□ -2.02
VPS27P40343 YBL071CYBL071C 309 nt2.44□□□□□ -2.02
VPS27P40343 YPL261CYPL261C 309 nt2.44□□□□□ -2.02
VPS27P40343 FAB1YFR019W 6837 nt2.44□□□□□ -2.02
VPS27P40343 ATG31YDR022C 591 nt2.43□□□□□ -2.02
VPS27P40343 YKR075W-AYKR075W-A 270 nt2.43□□□□□ -2.02
VPS27P40343 GPX2YBR244W 489 nt2.43□□□□□ -2.02
VPS27P40343 CRM1YGR218W 3255 nt2.43□□□□□ -2.02
VPS27P40343 GNT1YOR320C 1476 nt2.43□□□□□ -2.02
VPS27P40343 SSQ1YLR369W 1974 nt2.43□□□□□ -2.02
VPS27P40343 ATG9YDL149W 2994 nt2.43□□□□□ -2.02
VPS27P40343 CDC60YPL160W 3273 nt2.43□□□□□ -2.02
VPS27P40343 CDC27YBL084C 2277 nt2.42□□□□□ -2.02
VPS27P40343 GIM4YEL003W 336 nt2.42□□□□□ -2.02
VPS27P40343 YGL069CYGL069C 465 nt2.42□□□□□ -2.02
VPS27P40343 Q0142Q0142 177 nt2.42□□□□□ -2.02
VPS27P40343 USO1YDL058W 5373 nt2.42□□□□□ -2.02
VPS27P40343 YBR121C-AYBR121C-A 159 nt2.41□□□□□ -2.02
VPS27P40343 RIC1YLR039C 3171 nt2.41□□□□□ -2.02
VPS27P40343 YLR149CYLR149C 2193 nt2.4□□□□□ -2.02
VPS27P40343 YAR047CYAR047C 321 nt2.4□□□□□ -2.03
VPS27P40343 SOK2YMR016C 2358 nt2.4□□□□□ -2.03
VPS27P40343 PEP1YBL017C 4740 nt2.4□□□□□ -2.03
VPS27P40343 STH1YIL126W 4080 nt2.4□□□□□ -2.03
VPS27P40343 DAS1YJL149W 1992 nt2.4□□□□□ -2.03
VPS27P40343 PDR8YLR266C 2106 nt2.39□□□□□ -2.03
VPS27P40343 GRR1YJR090C 3456 nt2.39□□□□□ -2.03
VPS27P40343 ATG11YPR049C 3537 nt2.39□□□□□ -2.03
VPS27P40343 YLR053CYLR053C 327 nt2.39□□□□□ -2.03
VPS27P40343 CAT2YML042W 2013 nt2.39□□□□□ -2.03
VPS27P40343 YDL152WYDL152W 366 nt2.38□□□□□ -2.03
VPS27P40343 HOP2YGL033W 657 nt2.38□□□□□ -2.03
VPS27P40343 YML009C-AYML009C-A 327 nt2.38□□□□□ -2.03
VPS27P40343 DIS3YOL021C 3006 nt2.38□□□□□ -2.03
VPS27P40343 YGL239CYGL239C 315 nt2.37□□□□□ -2.03
VPS27P40343 YBR012CYBR012C 420 nt2.37□□□□□ -2.03
VPS27P40343 YPR099CYPR099C 357 nt2.37□□□□□ -2.03
VPS27P40343 YBL005W-BYBL005W-B 5268 nt2.37□□□□□ -2.03
VPS27P40343 NOT5YPR072W 1683 nt2.37□□□□□ -2.03
VPS27P40343 HER1YOR227W 3741 nt2.36□□□□□ -2.03
VPS27P40343 WIP1YDR374W-A 270 nt2.36□□□□□ -2.03
VPS27P40343 RPL37BYDR500C 267 nt2.36□□□□□ -2.03
VPS27P40343 HSK3YKL138C-A 210 nt2.36□□□□□ -2.03
VPS27P40343 YOR029WYOR029W 336 nt2.36□□□□□ -2.03
VPS27P40343 YPL182CYPL182C 384 nt2.36□□□□□ -2.03
VPS27P40343 TOR2YKL203C 7425 nt2.36□□□□□ -2.03
VPS27P40343 LYS9YNR050C 1341 nt2.36□□□□□ -2.03
VPS27P40343 IRR1YIL026C 3453 nt2.35□□□□□ -2.03
VPS27P40343 HIT1YJR055W 495 nt2.35□□□□□ -2.03
VPS27P40343 YOR121CYOR121C 306 nt2.35□□□□□ -2.03
VPS27P40343 YOR394C-AYOR394C-A 168 nt2.35□□□□□ -2.03
VPS27P40343 YBR224WYBR224W 516 nt2.35□□□□□ -2.03
VPS27P40343 YDR341CYDR341C 1824 nt2.35□□□□□ -2.03
VPS27P40343 SYH1YPL105C 2550 nt2.35□□□□□ -2.03
VPS27P40343 MGA2YIR033W 3342 nt2.35□□□□□ -2.03
VPS27P40343 YDL011CYDL011C 324 nt2.34□□□□□ -2.03
VPS27P40343 YER137W-AYER137W-A 306 nt2.34□□□□□ -2.03
VPS27P40343 UBP1YDL122W 2430 nt2.33□□□□□ -2.04
VPS27P40343 CFT2YLR115W 2580 nt2.33□□□□□ -2.04
VPS27P40343 RBK1YCR036W 1002 nt2.33□□□□□ -2.04
VPS27P40343 PGA1YNL158W 597 nt2.33□□□□□ -2.04
VPS27P40343 YCL023CYCL023C 348 nt2.33□□□□□ -2.04
VPS27P40343 VPS34YLR240W 2628 nt2.32□□□□□ -2.04
VPS27P40343 PEP3YLR148W 2757 nt2.32□□□□□ -2.04
VPS27P40343 YIL066W-AYIL066W-A 444 nt2.32□□□□□ -2.04
VPS27P40343 VMR1YHL035C 4779 nt2.32□□□□□ -2.04
VPS27P40343 DOT6YER088C 2013 nt2.31□□□□□ -2.04
VPS27P40343 NAM7YMR080C 2916 nt2.31□□□□□ -2.04
VPS27P40343 YMR272W-BYMR272W-B 108 nt2.31□□□□□ -2.04
VPS27P40343 RPL9BYNL067W 576 nt2.31□□□□□ -2.04
VPS27P40343 YHR028W-AYHR028W-A 321 nt2.3□□□□□ -2.04
VPS27P40343 TMA7YLR262C-A 195 nt2.3□□□□□ -2.04
VPS27P40343 YBL083CYBL083C 426 nt2.3□□□□□ -2.04
VPS27P40343 PAN3YKL025C 2040 nt2.3□□□□□ -2.04
VPS27P40343 HCS1YKL017C 2052 nt2.3□□□□□ -2.04
VPS27P40343 ELG1YOR144C 2376 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 52.4 ms