Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 RIC1YLR039C 3171 nt2.38□□□□□ -2.03
SSM4P40318 HSH155YMR288W 2916 nt2.38□□□□□ -2.03
SSM4P40318 EGD1YPL037C 474 nt2.38□□□□□ -2.03
SSM4P40318 MNE1YOR350C 1992 nt2.37□□□□□ -2.03
SSM4P40318 CDC27YBL084C 2277 nt2.37□□□□□ -2.03
SSM4P40318 STB4YMR019W 2850 nt2.37□□□□□ -2.03
SSM4P40318 CSF1YLR087C 8877 nt2.37□□□□□ -2.03
SSM4P40318 MKT1YNL085W 2493 nt2.37□□□□□ -2.03
SSM4P40318 YGL069CYGL069C 465 nt2.37□□□□□ -2.03
SSM4P40318 YMR001C-AYMR001C-A 231 nt2.37□□□□□ -2.03
SSM4P40318 GPX2YBR244W 489 nt2.37□□□□□ -2.03
SSM4P40318 UBC7YMR022W 498 nt2.36□□□□□ -2.03
SSM4P40318 YER023C-AYER023C-A 213 nt2.35□□□□□ -2.03
SSM4P40318 YER076W-AYER076W-A 348 nt2.35□□□□□ -2.03
SSM4P40318 YER079WYER079W 633 nt2.35□□□□□ -2.03
SSM4P40318 HOP2YGL033W 657 nt2.35□□□□□ -2.03
SSM4P40318 URM1YIL008W 300 nt2.35□□□□□ -2.03
SSM4P40318 YPR146CYPR146C 330 nt2.35□□□□□ -2.03
SSM4P40318 RUD3YOR216C 1455 nt2.35□□□□□ -2.03
SSM4P40318 IST2YBR086C 2841 nt2.35□□□□□ -2.03
SSM4P40318 SFB2YNL049C 2631 nt2.34□□□□□ -2.03
SSM4P40318 YOR192C-CYOR192C-C 237 nt2.34□□□□□ -2.04
SSM4P40318 CAT8YMR280C 4302 nt2.34□□□□□ -2.04
SSM4P40318 GRR1YJR090C 3456 nt2.33□□□□□ -2.04
SSM4P40318 VPH1YOR270C 2523 nt2.33□□□□□ -2.04
SSM4P40318 YLR149CYLR149C 2193 nt2.33□□□□□ -2.04
SSM4P40318 MRPL50YNR022C 420 nt2.33□□□□□ -2.04
SSM4P40318 LEE1YPL054W 906 nt2.33□□□□□ -2.04
SSM4P40318 DIE2YGR227W 1578 nt2.32□□□□□ -2.04
SSM4P40318 TOR2YKL203C 7425 nt2.32□□□□□ -2.04
SSM4P40318 SDH7YDR511W 402 nt2.32□□□□□ -2.04
SSM4P40318 QCR7YDR529C 384 nt2.32□□□□□ -2.04
SSM4P40318 YER087C-AYER087C-A 552 nt2.32□□□□□ -2.04
SSM4P40318 YHL009W-AYHL009W-A 1242 nt2.32□□□□□ -2.04
SSM4P40318 YLR053CYLR053C 327 nt2.32□□□□□ -2.04
SSM4P40318 YOL159CYOL159C 516 nt2.32□□□□□ -2.04
SSM4P40318 TRL1YJL087C 2484 nt2.31□□□□□ -2.04
SSM4P40318 YHR138CYHR138C 345 nt2.31□□□□□ -2.04
SSM4P40318 YLR287CYLR287C 1068 nt2.31□□□□□ -2.04
SSM4P40318 NOT5YPR072W 1683 nt2.3□□□□□ -2.04
SSM4P40318 CBS1YDL069C 690 nt2.3□□□□□ -2.04
SSM4P40318 YDR157WYDR157W 402 nt2.3□□□□□ -2.04
SSM4P40318 HSK3YKL138C-A 210 nt2.3□□□□□ -2.04
SSM4P40318 YDR118W-AYDR118W-A 117 nt2.29□□□□□ -2.04
SSM4P40318 YHL037CYHL037C 402 nt2.29□□□□□ -2.04
SSM4P40318 RPS24BYIL069C 408 nt2.29□□□□□ -2.04
SSM4P40318 SPO23YBR250W 1572 nt2.29□□□□□ -2.04
SSM4P40318 RTT101YJL047C 2529 nt2.29□□□□□ -2.04
SSM4P40318 LYS9YNR050C 1341 nt2.29□□□□□ -2.04
SSM4P40318 YDR269CYDR269C 324 nt2.28□□□□□ -2.04
SSM4P40318 YML084WYML084W 309 nt2.28□□□□□ -2.04
SSM4P40318 PGA1YNL158W 597 nt2.28□□□□□ -2.04
SSM4P40318 YOR394C-AYOR394C-A 168 nt2.28□□□□□ -2.04
SSM4P40318 YPL238CYPL238C 390 nt2.28□□□□□ -2.04
SSM4P40318 YBR121C-AYBR121C-A 159 nt2.28□□□□□ -2.04
SSM4P40318 YBR224WYBR224W 516 nt2.28□□□□□ -2.04
SSM4P40318 IRR1YIL026C 3453 nt2.27□□□□□ -2.05
SSM4P40318 YDL152WYDL152W 366 nt2.27□□□□□ -2.05
SSM4P40318 YHR210CYHR210C 1026 nt2.27□□□□□ -2.05
SSM4P40318 YPL185WYPL185W 396 nt2.27□□□□□ -2.05
SSM4P40318 YKR075W-AYKR075W-A 270 nt2.26□□□□□ -2.05
SSM4P40318 YBL071CYBL071C 309 nt2.26□□□□□ -2.05
SSM4P40318 YOR146WYOR146W 306 nt2.26□□□□□ -2.05
SSM4P40318 PEP3YLR148W 2757 nt2.26□□□□□ -2.05
SSM4P40318 MYO4YAL029C 4416 nt2.26□□□□□ -2.05
SSM4P40318 VMR1YHL035C 4779 nt2.25□□□□□ -2.05
SSM4P40318 RTT102YGR275W 474 nt2.25□□□□□ -2.05
SSM4P40318 YML009C-AYML009C-A 327 nt2.25□□□□□ -2.05
SSM4P40318 YPR099CYPR099C 357 nt2.25□□□□□ -2.05
SSM4P40318 TDA9YML081W 3756 nt2.25□□□□□ -2.05
SSM4P40318 MNL2YLR057W 2550 nt2.24□□□□□ -2.05
SSM4P40318 RGA1YOR127W 3024 nt2.24□□□□□ -2.05
SSM4P40318 YDL062WYDL062W 426 nt2.24□□□□□ -2.05
SSM4P40318 SWF1YDR126W 1011 nt2.24□□□□□ -2.05
SSM4P40318 YHR073W-AYHR073W-A 177 nt2.24□□□□□ -2.05
SSM4P40318 YBL083CYBL083C 426 nt2.24□□□□□ -2.05
SSM4P40318 CDC60YPL160W 3273 nt2.24□□□□□ -2.05
SSM4P40318 SYH1YPL105C 2550 nt2.24□□□□□ -2.05
SSM4P40318 YDR341CYDR341C 1824 nt2.24□□□□□ -2.05
SSM4P40318 SMY1YKL079W 1971 nt2.24□□□□□ -2.05
SSM4P40318 NUP192YJL039C 5052 nt2.24□□□□□ -2.05
SSM4P40318 ZRG8YER033C 3231 nt2.23□□□□□ -2.05
SSM4P40318 CTF4YPR135W 2784 nt2.23□□□□□ -2.05
SSM4P40318 YOR053WYOR053W 342 nt2.23□□□□□ -2.05
SSM4P40318 YPR012WYPR012W 255 nt2.23□□□□□ -2.05
SSM4P40318 YBR285WYBR285W 435 nt2.23□□□□□ -2.05
SSM4P40318 DOT6YER088C 2013 nt2.22□□□□□ -2.05
SSM4P40318 RPL37BYDR500C 267 nt2.22□□□□□ -2.05
SSM4P40318 YGL239CYGL239C 315 nt2.22□□□□□ -2.05
SSM4P40318 PFD1YJL179W 330 nt2.22□□□□□ -2.05
SSM4P40318 YLR434CYLR434C 384 nt2.22□□□□□ -2.05
SSM4P40318 CYB5YNL111C 363 nt2.22□□□□□ -2.05
SSM4P40318 YPL182CYPL182C 384 nt2.22□□□□□ -2.05
SSM4P40318 DCP2YNL118C 2913 nt2.22□□□□□ -2.05
SSM4P40318 PLC1YPL268W 2610 nt2.22□□□□□ -2.05
SSM4P40318 SEF1YBL066C 3447 nt2.21□□□□□ -2.06
SSM4P40318 YCR043CYCR043C 384 nt2.21□□□□□ -2.06
SSM4P40318 YHR071C-AYHR071C-A 321 nt2.21□□□□□ -2.06
SSM4P40318 YHR180W-AYHR180W-A 183 nt2.21□□□□□ -2.06
SSM4P40318 ELG1YOR144C 2376 nt2.21□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 53.2 ms