Protein–RNA interactions for Protein: P40046

VTC1, Vacuolar transporter chaperone 1, yeastyeast

RIP-Chip data

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTC1P40046 LCL2YLR104W 396 nt1.12□□□□□ -2.23
VTC1P40046 PKR1YMR123W 369 nt1.12□□□□□ -2.23
VTC1P40046 IRA1YBR140C 9279 nt1.12□□□□□ -2.23
VTC1P40046 DAS1YJL149W 1992 nt1.12□□□□□ -2.23
VTC1P40046 MSC6YOR354C 2079 nt1.11□□□□□ -2.23
VTC1P40046 YER188C-AYER188C-A 300 nt1.11□□□□□ -2.23
VTC1P40046 FYV12YOR183W 390 nt1.11□□□□□ -2.23
VTC1P40046 GPX2YBR244W 489 nt1.11□□□□□ -2.23
VTC1P40046 PMD1YER132C 5262 nt1.11□□□□□ -2.23
VTC1P40046 MNL2YLR057W 2550 nt1.1□□□□□ -2.23 RIP-Chip
VTC1P40046 SHE9YDR393W 1371 nt1.1□□□□□ -2.23
VTC1P40046 snR79snR79 84 nt1.1□□□□□ -2.23
VTC1P40046 snR84snR84 550 nt1.1□□□□□ -2.23
VTC1P40046 YER088C-AYER088C-A 324 nt1.1□□□□□ -2.23
VTC1P40046 EMC4YGL231C 573 nt1.1□□□□□ -2.23
VTC1P40046 CIC1YHR052W 1131 nt1.1□□□□□ -2.23
VTC1P40046 PGA1YNL158W 597 nt1.1□□□□□ -2.23
VTC1P40046 YGR250CYGR250C 2346 nt1.1□□□□□ -2.23
VTC1P40046 SEC21YNL287W 2808 nt1.09□□□□□ -2.23
VTC1P40046 CAJ1YER048C 1176 nt1.09□□□□□ -2.23
VTC1P40046 YKL111CYKL111C 336 nt1.09□□□□□ -2.23
VTC1P40046 EGD1YPL037C 474 nt1.09□□□□□ -2.23
VTC1P40046 SVS1YPL163C 783 nt1.09□□□□□ -2.23
VTC1P40046 MMS22YLR320W 4365 nt1.08□□□□□ -2.24
VTC1P40046 QCR7YDR529C 384 nt1.08□□□□□ -2.24
VTC1P40046 HUR1YGL168W 333 nt1.08□□□□□ -2.24
VTC1P40046 YHR139C-AYHR139C-A 312 nt1.08□□□□□ -2.24
VTC1P40046 YIL102CYIL102C 306 nt1.08□□□□□ -2.24
VTC1P40046 YJL015CYJL015C 285 nt1.08□□□□□ -2.24
VTC1P40046 YLR140WYLR140W 327 nt1.08□□□□□ -2.24
VTC1P40046 SGD1YLR336C 2700 nt1.08□□□□□ -2.24
VTC1P40046 AHC1YOR023C 1701 nt1.07□□□□□ -2.24
VTC1P40046 KAP122YGL016W 3246 nt1.07□□□□□ -2.24 RIP-Chip
VTC1P40046 YAP3YHL009C 993 nt1.07□□□□□ -2.24
VTC1P40046 YAL016C-BYAL016C-B 186 nt1.07□□□□□ -2.24
VTC1P40046 SPC1YJR010C-A 285 nt1.07□□□□□ -2.24
VTC1P40046 ABM1YJR108W 372 nt1.07□□□□□ -2.24
VTC1P40046 YBR121C-AYBR121C-A 159 nt1.07□□□□□ -2.24
VTC1P40046 IRR1YIL026C 3453 nt1.07□□□□□ -2.24
VTC1P40046 PEP3YLR148W 2757 nt1.07□□□□□ -2.24
VTC1P40046 NCA2YPR155C 1851 nt1.06□□□□□ -2.24 RIP-Chip
VTC1P40046 YDR250CYDR250C 276 nt1.06□□□□□ -2.24
VTC1P40046 YEL030C-AYEL030C-A 315 nt1.06□□□□□ -2.24
VTC1P40046 YER084W-AYER084W-A 513 nt1.06□□□□□ -2.24
VTC1P40046 CGI121YML036W 546 nt1.06□□□□□ -2.24
VTC1P40046 COA6YMR244C-A 315 nt1.06□□□□□ -2.24
VTC1P40046 YOR248WYOR248W 303 nt1.06□□□□□ -2.24
VTC1P40046 YPR146CYPR146C 330 nt1.06□□□□□ -2.24
VTC1P40046 SNF5YBR289W 2718 nt1.06□□□□□ -2.24
VTC1P40046 PPN1YDR452W 2025 nt1.05□□□□□ -2.24 RIP-Chip
VTC1P40046 YDL152WYDL152W 366 nt1.05□□□□□ -2.24
VTC1P40046 SMB1YER029C 591 nt1.05□□□□□ -2.24
VTC1P40046 RPL9AYGL147C 576 nt1.05□□□□□ -2.24
VTC1P40046 YHR028W-AYHR028W-A 321 nt1.05□□□□□ -2.24
VTC1P40046 MLH3YPL164C 2148 nt1.05□□□□□ -2.24
VTC1P40046 YPR039WYPR039W 336 nt1.05□□□□□ -2.24
VTC1P40046 SLM6YBR266C 453 nt1.05□□□□□ -2.24
VTC1P40046 TRM3YDL112W 4311 nt1.05□□□□□ -2.24
VTC1P40046 HNT1YDL125C 477 nt1.04□□□□□ -2.24
VTC1P40046 YJL022WYJL022W 309 nt1.04□□□□□ -2.24
VTC1P40046 APQ13YJL075C 417 nt1.04□□□□□ -2.24
VTC1P40046 PAU18YLL064C 363 nt1.04□□□□□ -2.24
VTC1P40046 GPI15YNL038W 690 nt1.04□□□□□ -2.24
VTC1P40046 PAU6YNR076W 363 nt1.04□□□□□ -2.24
VTC1P40046 snR189snR189 189 nt1.04□□□□□ -2.24
VTC1P40046 YCL046WYCL046W 324 nt1.04□□□□□ -2.24
VTC1P40046 ADR1YDR216W 3972 nt1.04□□□□□ -2.24
VTC1P40046 RLM1YPL089C 2031 nt1.04□□□□□ -2.24
VTC1P40046 SPR3YGR059W 1539 nt1.04□□□□□ -2.24
VTC1P40046 MET32YDR253C 576 nt1.03□□□□□ -2.24
VTC1P40046 YER023C-AYER023C-A 213 nt1.03□□□□□ -2.24
VTC1P40046 IES5YER092W 378 nt1.03□□□□□ -2.24
VTC1P40046 YGL024WYGL024W 336 nt1.03□□□□□ -2.24
VTC1P40046 YGR025WYGR025W 303 nt1.03□□□□□ -2.24
VTC1P40046 YGR045CYGR045C 363 nt1.03□□□□□ -2.24
VTC1P40046 TMA22YJR014W 597 nt1.03□□□□□ -2.24
VTC1P40046 DDR48YMR173W 1293 nt1.03□□□□□ -2.24
VTC1P40046 YNL303WYNL303W 348 nt1.03□□□□□ -2.24
VTC1P40046 MSH5YDL154W 2706 nt1.03□□□□□ -2.24
VTC1P40046 ALK1YGL021W 2283 nt1.03□□□□□ -2.25
VTC1P40046 SPC98YNL126W 2541 nt1.03□□□□□ -2.25
VTC1P40046 NUP192YJL039C 5052 nt1.02□□□□□ -2.25 RIP-Chip
VTC1P40046 RSM22YKL155C 1887 nt1.02□□□□□ -2.25
VTC1P40046 FCF2YLR051C 654 nt1.02□□□□□ -2.25
VTC1P40046 EST2YLR318W 2655 nt1.02□□□□□ -2.25
VTC1P40046 CAT8YMR280C 4302 nt1.02□□□□□ -2.25
VTC1P40046 YBR012W-AYBR012W-A 1323 nt1.02□□□□□ -2.25
VTC1P40046 YOR142W-AYOR142W-A 1323 nt1.02□□□□□ -2.25
VTC1P40046 snR13snR13 124 nt1.02□□□□□ -2.25
VTC1P40046 YBR071WYBR071W 636 nt1.02□□□□□ -2.25
VTC1P40046 YPR158W-AYPR158W-A 1323 nt1.02□□□□□ -2.25
VTC1P40046 YPR177CYPR177C 372 nt1.02□□□□□ -2.25
VTC1P40046 MAD1YGL086W 2250 nt1.01□□□□□ -2.25
VTC1P40046 SEF1YBL066C 3447 nt1.01□□□□□ -2.25
VTC1P40046 OSH6YKR003W 1347 nt1.01□□□□□ -2.25
VTC1P40046 RVS161YCR009C 798 nt1.01□□□□□ -2.25
VTC1P40046 YDR509WYDR509W 348 nt1.01□□□□□ -2.25
VTC1P40046 YEL050W-AYEL050W-A 192 nt1.01□□□□□ -2.25
VTC1P40046 YHR052W-AYHR052W-A 195 nt1.01□□□□□ -2.25
VTC1P40046 YHR054W-AYHR054W-A 195 nt1.01□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 26.1 ms