Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.9■■□□□ 1.74
COL15A1P39059 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL15A1P39059 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL15A1P39059 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.89■■□□□ 1.74
COL15A1P39059 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.89■■□□□ 1.74
COL15A1P39059 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
COL15A1P39059 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL15A1P39059 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
COL15A1P39059 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL15A1P39059 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL15A1P39059 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL15A1P39059 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.88■■□□□ 1.73
COL15A1P39059 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.88■■□□□ 1.73
COL15A1P39059 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL15A1P39059 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
COL15A1P39059 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.88■■□□□ 1.73
COL15A1P39059 MAX-217ENST00000557277 728 ntTSL 3 BASIC25.88■■□□□ 1.73
COL15A1P39059 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.88■■□□□ 1.73
COL15A1P39059 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.88■■□□□ 1.73
COL15A1P39059 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL15A1P39059 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC25.88■■□□□ 1.73
COL15A1P39059 AC012306.2-201ENST00000609350 630 ntBASIC25.88■■□□□ 1.73
COL15A1P39059 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL15A1P39059 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.88■■□□□ 1.73
COL15A1P39059 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.87■■□□□ 1.73
COL15A1P39059 AC079834.2-201ENST00000609776 1949 ntBASIC25.87■■□□□ 1.73
COL15A1P39059 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
COL15A1P39059 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL15A1P39059 FBXW4P1-201ENST00000426721 2239 ntBASIC25.87■■□□□ 1.73
COL15A1P39059 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.87■■□□□ 1.73
COL15A1P39059 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.87■■□□□ 1.73
COL15A1P39059 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL15A1P39059 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC25.87■■□□□ 1.73
COL15A1P39059 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL15A1P39059 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.87■■□□□ 1.73
COL15A1P39059 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
COL15A1P39059 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL15A1P39059 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
COL15A1P39059 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL15A1P39059 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL15A1P39059 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL15A1P39059 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL15A1P39059 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL15A1P39059 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
COL15A1P39059 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.86■■□□□ 1.73
COL15A1P39059 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL15A1P39059 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.86■■□□□ 1.73
COL15A1P39059 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC25.86■■□□□ 1.73
COL15A1P39059 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.86■■□□□ 1.73
COL15A1P39059 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL15A1P39059 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL15A1P39059 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL15A1P39059 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL15A1P39059 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL15A1P39059 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.86■■□□□ 1.73
COL15A1P39059 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL15A1P39059 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.85■■□□□ 1.73
COL15A1P39059 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.85■■□□□ 1.73
COL15A1P39059 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.85■■□□□ 1.73
COL15A1P39059 AC097493.4-201ENST00000641197 219 ntBASIC25.85■■□□□ 1.73
COL15A1P39059 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL15A1P39059 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL15A1P39059 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL15A1P39059 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL15A1P39059 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.84■■□□□ 1.73
COL15A1P39059 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC25.84■■□□□ 1.73
COL15A1P39059 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.84■■□□□ 1.73
COL15A1P39059 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.84■■□□□ 1.73
COL15A1P39059 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL15A1P39059 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
COL15A1P39059 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL15A1P39059 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.84■■□□□ 1.73
COL15A1P39059 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL15A1P39059 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.84■■□□□ 1.73
COL15A1P39059 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
COL15A1P39059 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL15A1P39059 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
COL15A1P39059 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.83■■□□□ 1.73
COL15A1P39059 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL15A1P39059 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.83■■□□□ 1.73
COL15A1P39059 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.83■■□□□ 1.73
COL15A1P39059 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.83■■□□□ 1.73
COL15A1P39059 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL15A1P39059 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.83■■□□□ 1.73
COL15A1P39059 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
COL15A1P39059 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.83■■□□□ 1.73
COL15A1P39059 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.83■■□□□ 1.73
COL15A1P39059 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL15A1P39059 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL15A1P39059 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL15A1P39059 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL15A1P39059 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
COL15A1P39059 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL15A1P39059 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL15A1P39059 RCN1P1-201ENST00000400413 996 ntBASIC25.82■■□□□ 1.72
COL15A1P39059 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL15A1P39059 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.82■■□□□ 1.72
COL15A1P39059 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL15A1P39059 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL15A1P39059 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms