Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.63■□□□□ 0.25
SNCAP37840 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNCAP37840 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNCAP37840 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SNCAP37840 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.63■□□□□ 0.25
SNCAP37840 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SNCAP37840 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNCAP37840 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.63■□□□□ 0.25
SNCAP37840 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.63■□□□□ 0.25
SNCAP37840 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
SNCAP37840 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.63■□□□□ 0.25
SNCAP37840 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNCAP37840 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SNCAP37840 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.63■□□□□ 0.25
SNCAP37840 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.63■□□□□ 0.25
SNCAP37840 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SNCAP37840 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNCAP37840 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.63■□□□□ 0.25
SNCAP37840 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.62■□□□□ 0.25
SNCAP37840 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
SNCAP37840 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.62■□□□□ 0.25
SNCAP37840 AC131212.1-201ENST00000613771 668 ntBASIC16.62■□□□□ 0.25
SNCAP37840 AC105233.4-201ENST00000642045 216 ntBASIC16.62■□□□□ 0.25
SNCAP37840 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
SNCAP37840 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SNCAP37840 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.62■□□□□ 0.25
SNCAP37840 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.62■□□□□ 0.25
SNCAP37840 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNCAP37840 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SNCAP37840 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.62■□□□□ 0.25
SNCAP37840 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.61■□□□□ 0.25
SNCAP37840 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SNCAP37840 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.61■□□□□ 0.25
SNCAP37840 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.61■□□□□ 0.25
SNCAP37840 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.61■□□□□ 0.25
SNCAP37840 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.61■□□□□ 0.25
SNCAP37840 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.61■□□□□ 0.25
SNCAP37840 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.61■□□□□ 0.25
SNCAP37840 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SNCAP37840 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
SNCAP37840 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNCAP37840 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.61■□□□□ 0.25
SNCAP37840 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SNCAP37840 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SNCAP37840 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 AC121338.2-201ENST00000622535 1744 ntBASIC16.6■□□□□ 0.25
SNCAP37840 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.6■□□□□ 0.25
SNCAP37840 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
SNCAP37840 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.6■□□□□ 0.25
SNCAP37840 AC027682.1-201ENST00000562846 899 ntBASIC16.6■□□□□ 0.25
SNCAP37840 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.6■□□□□ 0.25
SNCAP37840 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SNCAP37840 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SNCAP37840 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SNCAP37840 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 AC099778.1-201ENST00000568593 1911 ntBASIC16.6■□□□□ 0.25
SNCAP37840 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.6■□□□□ 0.25
SNCAP37840 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.6■□□□□ 0.25
SNCAP37840 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNCAP37840 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNCAP37840 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNCAP37840 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNCAP37840 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNCAP37840 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.59■□□□□ 0.25
SNCAP37840 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SNCAP37840 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms