Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC25.07■■□□□ 1.6
KCNA3P22001 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
KCNA3P22001 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.07■■□□□ 1.6
KCNA3P22001 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
KCNA3P22001 AL121894.2-201ENST00000602977 491 ntBASIC25.07■■□□□ 1.6
KCNA3P22001 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
KCNA3P22001 CR392000.1-201ENST00000624770 1228 ntBASIC25.07■■□□□ 1.6
KCNA3P22001 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KCNA3P22001 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.07■■□□□ 1.6
KCNA3P22001 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KCNA3P22001 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.07■■□□□ 1.6
KCNA3P22001 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC25.07■■□□□ 1.6
KCNA3P22001 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.07■■□□□ 1.6
KCNA3P22001 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
KCNA3P22001 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KCNA3P22001 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KCNA3P22001 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.07■■□□□ 1.6
KCNA3P22001 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.07■■□□□ 1.6
KCNA3P22001 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.07■■□□□ 1.6
KCNA3P22001 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
KCNA3P22001 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KCNA3P22001 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KCNA3P22001 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
KCNA3P22001 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.06■■□□□ 1.6
KCNA3P22001 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
KCNA3P22001 AC023632.3-201ENST00000521633 145 ntBASIC25.06■■□□□ 1.6
KCNA3P22001 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.06■■□□□ 1.6
KCNA3P22001 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
KCNA3P22001 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC25.06■■□□□ 1.6
KCNA3P22001 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.06■■□□□ 1.6
KCNA3P22001 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.06■■□□□ 1.6
KCNA3P22001 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.06■■□□□ 1.6
KCNA3P22001 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
KCNA3P22001 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.05■■□□□ 1.6
KCNA3P22001 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
KCNA3P22001 UPK3BP1-201ENST00000428678 509 ntBASIC25.05■■□□□ 1.6
KCNA3P22001 ISCU-203ENST00000431221 799 ntTSL 2 BASIC25.05■■□□□ 1.6
KCNA3P22001 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC25.05■■□□□ 1.6
KCNA3P22001 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC25.05■■□□□ 1.6
KCNA3P22001 AL358472.4-201ENST00000633140 710 ntBASIC25.05■■□□□ 1.6
KCNA3P22001 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.05■■□□□ 1.6
KCNA3P22001 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.05■■□□□ 1.6
KCNA3P22001 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
KCNA3P22001 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
KCNA3P22001 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
KCNA3P22001 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
KCNA3P22001 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
KCNA3P22001 KSR1P1-201ENST00000446298 240 ntBASIC25.04■■□□□ 1.6
KCNA3P22001 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.04■■□□□ 1.6
KCNA3P22001 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.04■■□□□ 1.6
KCNA3P22001 TOLLIP-AS1-201ENST00000530897 939 ntBASIC25.04■■□□□ 1.6
KCNA3P22001 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.04■■□□□ 1.6
KCNA3P22001 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.04■■□□□ 1.6
KCNA3P22001 AC004264.1-201ENST00000608354 794 ntBASIC25.04■■□□□ 1.6
KCNA3P22001 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
KCNA3P22001 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC25.04■■□□□ 1.6
KCNA3P22001 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
KCNA3P22001 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
KCNA3P22001 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
KCNA3P22001 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.03■■□□□ 1.6
KCNA3P22001 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
KCNA3P22001 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.03■■□□□ 1.6
KCNA3P22001 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
KCNA3P22001 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
KCNA3P22001 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
KCNA3P22001 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.03■■□□□ 1.6
KCNA3P22001 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.03■■□□□ 1.6
KCNA3P22001 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
KCNA3P22001 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
KCNA3P22001 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.03■■□□□ 1.6
KCNA3P22001 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
KCNA3P22001 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
KCNA3P22001 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 LGALS8-AS1-201ENST00000487567 1457 ntBASIC25.02■■□□□ 1.6
KCNA3P22001 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.02■■□□□ 1.6
KCNA3P22001 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
KCNA3P22001 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
KCNA3P22001 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 NIFKP9-201ENST00000419265 221 ntBASIC25.02■■□□□ 1.6
KCNA3P22001 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC25.02■■□□□ 1.6
KCNA3P22001 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC25.02■■□□□ 1.6
KCNA3P22001 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
KCNA3P22001 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.02■■□□□ 1.6
KCNA3P22001 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.6
KCNA3P22001 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
KCNA3P22001 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
KCNA3P22001 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
KCNA3P22001 AC127496.7-201ENST00000625110 1798 ntBASIC25.01■■□□□ 1.59
KCNA3P22001 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
KCNA3P22001 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.01■■□□□ 1.59
KCNA3P22001 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms