Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSR1P21757 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MSR1P21757 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSR1P21757 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.89■□□□□ 0.45
MSR1P21757 AC069236.1-201ENST00000604339 616 ntBASIC17.89■□□□□ 0.45
MSR1P21757 AL356652.1-201ENST00000615962 565 ntBASIC17.89■□□□□ 0.45
MSR1P21757 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MSR1P21757 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSR1P21757 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSR1P21757 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.89■□□□□ 0.45
MSR1P21757 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSR1P21757 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MSR1P21757 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
MSR1P21757 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSR1P21757 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MSR1P21757 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MSR1P21757 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
MSR1P21757 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MSR1P21757 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
MSR1P21757 CYP2T1P-201ENST00000432607 1285 ntBASIC17.88■□□□□ 0.45
MSR1P21757 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.88■□□□□ 0.45
MSR1P21757 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
MSR1P21757 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.88■□□□□ 0.45
MSR1P21757 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.88■□□□□ 0.45
MSR1P21757 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.88■□□□□ 0.45
MSR1P21757 AC008694.1-202ENST00000636953 945 ntBASIC17.88■□□□□ 0.45
MSR1P21757 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
MSR1P21757 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MSR1P21757 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MSR1P21757 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
MSR1P21757 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
MSR1P21757 AC073130.3-201ENST00000624389 2278 ntBASIC17.87■□□□□ 0.45
MSR1P21757 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.87■□□□□ 0.45
MSR1P21757 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.87■□□□□ 0.45
MSR1P21757 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.87■□□□□ 0.45
MSR1P21757 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.87■□□□□ 0.45
MSR1P21757 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MSR1P21757 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.87■□□□□ 0.45
MSR1P21757 AC100791.3-201ENST00000617619 330 ntBASIC17.87■□□□□ 0.45
MSR1P21757 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.87■□□□□ 0.45
MSR1P21757 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MSR1P21757 AL512408.1-201ENST00000569378 2000 ntBASIC17.87■□□□□ 0.45
MSR1P21757 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.87■□□□□ 0.45
MSR1P21757 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.87■□□□□ 0.45
MSR1P21757 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MSR1P21757 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
MSR1P21757 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MSR1P21757 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSR1P21757 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.86■□□□□ 0.45
MSR1P21757 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MSR1P21757 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.86■□□□□ 0.45
MSR1P21757 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.86■□□□□ 0.45
MSR1P21757 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSR1P21757 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSR1P21757 MCRIP2P1-201ENST00000394346 511 ntBASIC17.86■□□□□ 0.45
MSR1P21757 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.86■□□□□ 0.45
MSR1P21757 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.86■□□□□ 0.45
MSR1P21757 AL137784.2-201ENST00000607332 1000 ntBASIC17.86■□□□□ 0.45
MSR1P21757 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSR1P21757 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSR1P21757 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.86■□□□□ 0.45
MSR1P21757 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSR1P21757 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.86■□□□□ 0.45
MSR1P21757 AL162377.1-201ENST00000618844 1793 ntBASIC17.86■□□□□ 0.45
MSR1P21757 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MSR1P21757 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MSR1P21757 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms