Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.64■□□□□ 0.89
NFKB1P19838 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NFKB1P19838 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NFKB1P19838 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
NFKB1P19838 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
NFKB1P19838 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NFKB1P19838 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKB1P19838 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NFKB1P19838 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.64■□□□□ 0.89
NFKB1P19838 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKB1P19838 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKB1P19838 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NFKB1P19838 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NFKB1P19838 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKB1P19838 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 MCRIP2P1-201ENST00000394346 511 ntBASIC20.63■□□□□ 0.89
NFKB1P19838 CDCA4P2-201ENST00000441182 718 ntBASIC20.63■□□□□ 0.89
NFKB1P19838 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKB1P19838 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKB1P19838 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.63■□□□□ 0.89
NFKB1P19838 AC008694.1-202ENST00000636953 945 ntBASIC20.63■□□□□ 0.89
NFKB1P19838 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKB1P19838 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKB1P19838 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NFKB1P19838 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.63■□□□□ 0.89
NFKB1P19838 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.62■□□□□ 0.89
NFKB1P19838 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFKB1P19838 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFKB1P19838 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFKB1P19838 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.62■□□□□ 0.89
NFKB1P19838 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NFKB1P19838 DPP3P2-201ENST00000416030 1696 ntBASIC20.62■□□□□ 0.89
NFKB1P19838 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.62■□□□□ 0.89
NFKB1P19838 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFKB1P19838 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.62■□□□□ 0.89
NFKB1P19838 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.62■□□□□ 0.89
NFKB1P19838 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.62■□□□□ 0.89
NFKB1P19838 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.62■□□□□ 0.89
NFKB1P19838 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.62■□□□□ 0.89
NFKB1P19838 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.62■□□□□ 0.89
NFKB1P19838 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFKB1P19838 AC100791.3-201ENST00000617619 330 ntBASIC20.62■□□□□ 0.89
NFKB1P19838 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NFKB1P19838 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.62■□□□□ 0.89
NFKB1P19838 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NFKB1P19838 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NFKB1P19838 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKB1P19838 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.61■□□□□ 0.89
NFKB1P19838 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKB1P19838 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.61■□□□□ 0.89
NFKB1P19838 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKB1P19838 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKB1P19838 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
NFKB1P19838 AC093787.1-201ENST00000450396 207 ntBASIC20.61■□□□□ 0.89
NFKB1P19838 OR10C1-204ENST00000622521 1039 ntBASIC20.61■□□□□ 0.89
NFKB1P19838 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKB1P19838 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NFKB1P19838 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NFKB1P19838 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKB1P19838 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NFKB1P19838 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
NFKB1P19838 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NFKB1P19838 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
NFKB1P19838 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.61■□□□□ 0.89
NFKB1P19838 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NFKB1P19838 AC099778.1-201ENST00000568593 1911 ntBASIC20.61■□□□□ 0.89
NFKB1P19838 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKB1P19838 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKB1P19838 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NFKB1P19838 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NFKB1P19838 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKB1P19838 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKB1P19838 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NFKB1P19838 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.6■□□□□ 0.89
NFKB1P19838 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.6■□□□□ 0.89
NFKB1P19838 AL355472.2-201ENST00000422958 438 ntBASIC20.6■□□□□ 0.89
NFKB1P19838 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.6■□□□□ 0.89
NFKB1P19838 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NFKB1P19838 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.6■□□□□ 0.89
NFKB1P19838 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKB1P19838 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKB1P19838 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.6■□□□□ 0.89
NFKB1P19838 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKB1P19838 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKB1P19838 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKB1P19838 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.6■□□□□ 0.89
NFKB1P19838 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NFKB1P19838 AC112907.3-201ENST00000577781 2400 ntBASIC20.59■□□□□ 0.89
NFKB1P19838 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms