Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AP000974.1-201ENST00000623909 2387 ntBASIC17.77■□□□□ 0.44
ATF1P18846 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ATF1P18846 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF1P18846 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATF1P18846 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATF1P18846 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ATF1P18846 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.77■□□□□ 0.43
ATF1P18846 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATF1P18846 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ATF1P18846 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.76■□□□□ 0.43
ATF1P18846 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATF1P18846 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATF1P18846 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.76■□□□□ 0.43
ATF1P18846 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATF1P18846 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.76■□□□□ 0.43
ATF1P18846 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.76■□□□□ 0.43
ATF1P18846 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.76■□□□□ 0.43
ATF1P18846 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
ATF1P18846 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATF1P18846 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATF1P18846 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.76■□□□□ 0.43
ATF1P18846 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ATF1P18846 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
ATF1P18846 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.75■□□□□ 0.43
ATF1P18846 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ATF1P18846 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.75■□□□□ 0.43
ATF1P18846 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 IRS3P-201ENST00000223076 1006 ntBASIC17.75■□□□□ 0.43
ATF1P18846 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
ATF1P18846 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.75■□□□□ 0.43
ATF1P18846 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.75■□□□□ 0.43
ATF1P18846 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATF1P18846 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 AC138907.5-202ENST00000569484 235 ntBASIC17.74■□□□□ 0.43
ATF1P18846 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.74■□□□□ 0.43
ATF1P18846 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.74■□□□□ 0.43
ATF1P18846 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATF1P18846 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
ATF1P18846 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.74■□□□□ 0.43
ATF1P18846 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
ATF1P18846 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATF1P18846 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATF1P18846 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATF1P18846 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATF1P18846 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.73■□□□□ 0.43
ATF1P18846 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.73■□□□□ 0.43
ATF1P18846 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATF1P18846 AC005837.3-201ENST00000612163 286 ntBASIC17.73■□□□□ 0.43
ATF1P18846 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATF1P18846 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ATF1P18846 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATF1P18846 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATF1P18846 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATF1P18846 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ATF1P18846 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.73■□□□□ 0.43
ATF1P18846 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATF1P18846 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATF1P18846 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATF1P18846 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATF1P18846 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATF1P18846 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ATF1P18846 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATF1P18846 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATF1P18846 TNXA-203ENST00000507684 2038 ntBASIC17.72■□□□□ 0.43
ATF1P18846 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ATF1P18846 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.72■□□□□ 0.43
ATF1P18846 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.72■□□□□ 0.43
ATF1P18846 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATF1P18846 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.72■□□□□ 0.43
ATF1P18846 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATF1P18846 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATF1P18846 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATF1P18846 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.72■□□□□ 0.43
ATF1P18846 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATF1P18846 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATF1P18846 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.72■□□□□ 0.43
ATF1P18846 AC105265.2-201ENST00000467189 838 ntBASIC17.72■□□□□ 0.43
ATF1P18846 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
ATF1P18846 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms