Protein–RNA interactions for Protein: P18754

RCC1, Regulator of chromosome condensation, humanhuman

Predicted RBP Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1P18754 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.09■□□□□ 0.33
RCC1P18754 AL162377.1-201ENST00000618844 1793 ntBASIC17.09■□□□□ 0.33
RCC1P18754 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RCC1P18754 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RCC1P18754 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.09■□□□□ 0.33
RCC1P18754 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.08■□□□□ 0.33
RCC1P18754 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.08■□□□□ 0.33
RCC1P18754 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RCC1P18754 LETM1P2-201ENST00000597330 2178 ntBASIC17.08■□□□□ 0.33
RCC1P18754 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.08■□□□□ 0.33
RCC1P18754 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RCC1P18754 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RCC1P18754 AC116050.2-201ENST00000612102 1779 ntBASIC17.08■□□□□ 0.33
RCC1P18754 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCC1P18754 AC004854.2-201ENST00000608450 1441 ntBASIC17.08■□□□□ 0.32
RCC1P18754 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RCC1P18754 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.08■□□□□ 0.32
RCC1P18754 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RCC1P18754 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.08■□□□□ 0.32
RCC1P18754 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.08■□□□□ 0.32
RCC1P18754 KRT18P14-201ENST00000534205 1250 ntBASIC17.08■□□□□ 0.32
RCC1P18754 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RCC1P18754 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.08■□□□□ 0.32
RCC1P18754 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.08■□□□□ 0.32
RCC1P18754 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCC1P18754 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCC1P18754 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCC1P18754 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
RCC1P18754 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCC1P18754 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RCC1P18754 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RCC1P18754 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RCC1P18754 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCC1P18754 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCC1P18754 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RCC1P18754 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.07■□□□□ 0.32
RCC1P18754 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RCC1P18754 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RCC1P18754 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCC1P18754 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RCC1P18754 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCC1P18754 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCC1P18754 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCC1P18754 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RCC1P18754 ZNRF2P3-201ENST00000424200 374 ntBASIC17.07■□□□□ 0.32
RCC1P18754 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.07■□□□□ 0.32
RCC1P18754 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.07■□□□□ 0.32
RCC1P18754 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.07■□□□□ 0.32
RCC1P18754 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
RCC1P18754 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RCC1P18754 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.07■□□□□ 0.32
RCC1P18754 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCC1P18754 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.07■□□□□ 0.32
RCC1P18754 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RCC1P18754 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCC1P18754 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.07■□□□□ 0.32
RCC1P18754 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RCC1P18754 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RCC1P18754 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.06■□□□□ 0.32
RCC1P18754 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RCC1P18754 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.06■□□□□ 0.32
RCC1P18754 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.06■□□□□ 0.32
RCC1P18754 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.06■□□□□ 0.32
RCC1P18754 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.06■□□□□ 0.32
RCC1P18754 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RCC1P18754 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.06■□□□□ 0.32
RCC1P18754 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.06■□□□□ 0.32
RCC1P18754 AC092720.2-201ENST00000602388 1665 ntBASIC17.06■□□□□ 0.32
RCC1P18754 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RCC1P18754 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.06■□□□□ 0.32
RCC1P18754 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.06■□□□□ 0.32
RCC1P18754 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.06■□□□□ 0.32
RCC1P18754 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCC1P18754 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.05■□□□□ 0.32
RCC1P18754 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCC1P18754 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.05■□□□□ 0.32
RCC1P18754 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
RCC1P18754 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCC1P18754 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms