Protein–RNA interactions for Protein: P13637

ATP1A3, Sodium/potassium-transporting ATPase subunit alpha-3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3P13637 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A3P13637 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
ATP1A3P13637 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A3P13637 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP1A3P13637 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP1A3P13637 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A3P13637 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A3P13637 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
ATP1A3P13637 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP1A3P13637 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A3P13637 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.35■■□□□ 1.17
ATP1A3P13637 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A3P13637 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.35■■□□□ 1.17
ATP1A3P13637 DUX4L2-201ENST00000561772 1275 ntBASIC22.35■■□□□ 1.17
ATP1A3P13637 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP1A3P13637 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
ATP1A3P13637 AP001160.3-201ENST00000601484 763 ntBASIC22.35■■□□□ 1.17
ATP1A3P13637 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.35■■□□□ 1.17
ATP1A3P13637 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.35■■□□□ 1.17
ATP1A3P13637 DUX4L6-201ENST00000626483 1275 ntBASIC22.35■■□□□ 1.17
ATP1A3P13637 DUX4L1-201ENST00000627662 1275 ntBASIC22.35■■□□□ 1.17
ATP1A3P13637 DUX4L8-201ENST00000629013 1275 ntBASIC22.35■■□□□ 1.17
ATP1A3P13637 DUX4L3-201ENST00000630187 1275 ntBASIC22.35■■□□□ 1.17
ATP1A3P13637 DUX4L7-201ENST00000630678 1275 ntBASIC22.35■■□□□ 1.17
ATP1A3P13637 DUX4L5-201ENST00000630834 1275 ntBASIC22.35■■□□□ 1.17
ATP1A3P13637 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.35■■□□□ 1.17
ATP1A3P13637 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A3P13637 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
ATP1A3P13637 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A3P13637 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A3P13637 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.34■■□□□ 1.17
ATP1A3P13637 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
ATP1A3P13637 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
ATP1A3P13637 KRT8P36-201ENST00000489121 1440 ntBASIC22.34■■□□□ 1.17
ATP1A3P13637 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ATP1A3P13637 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP1A3P13637 AC091799.1-201ENST00000422823 811 ntBASIC22.34■■□□□ 1.17
ATP1A3P13637 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP1A3P13637 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP1A3P13637 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP1A3P13637 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP1A3P13637 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATP1A3P13637 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATP1A3P13637 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ATP1A3P13637 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.33■■□□□ 1.17
ATP1A3P13637 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATP1A3P13637 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.33■■□□□ 1.17
ATP1A3P13637 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATP1A3P13637 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATP1A3P13637 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.33■■□□□ 1.17
ATP1A3P13637 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ATP1A3P13637 AC027612.3-201ENST00000413684 1047 ntBASIC22.33■■□□□ 1.17
ATP1A3P13637 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.33■■□□□ 1.17
ATP1A3P13637 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ATP1A3P13637 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
ATP1A3P13637 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
ATP1A3P13637 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ATP1A3P13637 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ATP1A3P13637 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
ATP1A3P13637 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
ATP1A3P13637 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ATP1A3P13637 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ATP1A3P13637 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP1A3P13637 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.32■■□□□ 1.16
ATP1A3P13637 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
ATP1A3P13637 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP1A3P13637 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP1A3P13637 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP1A3P13637 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP1A3P13637 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ATP1A3P13637 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.32■■□□□ 1.16
ATP1A3P13637 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.32■■□□□ 1.16
ATP1A3P13637 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP1A3P13637 AC142381.2-201ENST00000566120 298 ntBASIC22.32■■□□□ 1.16
ATP1A3P13637 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP1A3P13637 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.32■■□□□ 1.16
ATP1A3P13637 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP1A3P13637 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP1A3P13637 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
ATP1A3P13637 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP1A3P13637 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP1A3P13637 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
ATP1A3P13637 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP1A3P13637 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
ATP1A3P13637 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP1A3P13637 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
ATP1A3P13637 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP1A3P13637 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP1A3P13637 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ATP1A3P13637 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP1A3P13637 AC018445.3-201ENST00000624177 1945 ntBASIC22.3■■□□□ 1.16
ATP1A3P13637 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
ATP1A3P13637 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP1A3P13637 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
ATP1A3P13637 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ATP1A3P13637 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.3■■□□□ 1.16
ATP1A3P13637 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP1A3P13637 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ATP1A3P13637 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP1A3P13637 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms