Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
RARAP10276 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RARAP10276 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RARAP10276 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.27■■□□□ 1
RARAP10276 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RARAP10276 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.27■■□□□ 1
RARAP10276 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RARAP10276 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RARAP10276 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.26■□□□□ 0.99
RARAP10276 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RARAP10276 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RARAP10276 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RARAP10276 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RARAP10276 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RARAP10276 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.26■□□□□ 0.99
RARAP10276 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.26■□□□□ 0.99
RARAP10276 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
RARAP10276 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RARAP10276 AL591742.1-201ENST00000604433 565 ntBASIC21.26■□□□□ 0.99
RARAP10276 AC011767.1-201ENST00000617410 1153 ntBASIC21.26■□□□□ 0.99
RARAP10276 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RARAP10276 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RARAP10276 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.26■□□□□ 0.99
RARAP10276 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RARAP10276 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RARAP10276 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RARAP10276 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
RARAP10276 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.26■□□□□ 0.99
RARAP10276 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.26■□□□□ 0.99
RARAP10276 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.25■□□□□ 0.99
RARAP10276 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RARAP10276 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RARAP10276 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RARAP10276 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RARAP10276 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RARAP10276 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RARAP10276 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.25■□□□□ 0.99
RARAP10276 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RARAP10276 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.25■□□□□ 0.99
RARAP10276 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.25■□□□□ 0.99
RARAP10276 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RARAP10276 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.25■□□□□ 0.99
RARAP10276 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.25■□□□□ 0.99
RARAP10276 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
RARAP10276 DUX4L16-201ENST00000555130 1264 ntBASIC21.25■□□□□ 0.99
RARAP10276 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.25■□□□□ 0.99
RARAP10276 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.25■□□□□ 0.99
RARAP10276 AC013268.1-206ENST00000638368 961 ntBASIC21.25■□□□□ 0.99
RARAP10276 AC112229.1-201ENST00000639295 961 ntBASIC21.25■□□□□ 0.99
RARAP10276 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.25■□□□□ 0.99
RARAP10276 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RARAP10276 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RARAP10276 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.25■□□□□ 0.99
RARAP10276 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RARAP10276 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RARAP10276 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
RARAP10276 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RARAP10276 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RARAP10276 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RARAP10276 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RARAP10276 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RARAP10276 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RARAP10276 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RARAP10276 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RARAP10276 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RARAP10276 AC007322.4-201ENST00000509611 723 ntBASIC21.24■□□□□ 0.99
RARAP10276 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
RARAP10276 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RARAP10276 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RARAP10276 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RARAP10276 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.24■□□□□ 0.99
RARAP10276 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RARAP10276 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.23■□□□□ 0.99
RARAP10276 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RARAP10276 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.23■□□□□ 0.99
RARAP10276 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RARAP10276 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RARAP10276 CNN2P6-201ENST00000439038 900 ntBASIC21.23■□□□□ 0.99
RARAP10276 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.23■□□□□ 0.99
RARAP10276 AC022517.1-201ENST00000592429 346 ntBASIC21.23■□□□□ 0.99
RARAP10276 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RARAP10276 AC016405.3-201ENST00000607710 860 ntBASIC21.23■□□□□ 0.99
RARAP10276 FAM21FP-204ENST00000608637 956 ntBASIC21.23■□□□□ 0.99
RARAP10276 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.23■□□□□ 0.99
RARAP10276 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RARAP10276 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RARAP10276 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RARAP10276 TCF3P1-201ENST00000423021 1937 ntBASIC21.23■□□□□ 0.99
RARAP10276 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RARAP10276 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RARAP10276 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.23■□□□□ 0.99
RARAP10276 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.23■□□□□ 0.99
RARAP10276 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RARAP10276 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.22■□□□□ 0.99
RARAP10276 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.22■□□□□ 0.99
RARAP10276 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RARAP10276 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RARAP10276 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RARAP10276 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RARAP10276 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms