Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RB1P06400 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RB1P06400 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.56■■□□□ 1.04
RB1P06400 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.56■■□□□ 1.04
RB1P06400 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.56■■□□□ 1.04
RB1P06400 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.56■■□□□ 1.04
RB1P06400 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.56■■□□□ 1.04
RB1P06400 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.56■■□□□ 1.04
RB1P06400 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RB1P06400 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RB1P06400 AC079598.2-202ENST00000546624 1451 ntBASIC21.56■■□□□ 1.04
RB1P06400 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RB1P06400 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.56■■□□□ 1.04
RB1P06400 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RB1P06400 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.55■■□□□ 1.04
RB1P06400 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RB1P06400 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.55■■□□□ 1.04
RB1P06400 AP002982.1-201ENST00000492365 877 ntBASIC21.55■■□□□ 1.04
RB1P06400 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.55■■□□□ 1.04
RB1P06400 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RB1P06400 REXO1L10P-201ENST00000615707 1290 ntBASIC21.55■■□□□ 1.04
RB1P06400 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RB1P06400 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.55■■□□□ 1.04
RB1P06400 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RB1P06400 AC012676.1-201ENST00000574705 1949 ntBASIC21.55■■□□□ 1.04
RB1P06400 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.55■■□□□ 1.04
RB1P06400 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RB1P06400 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.55■■□□□ 1.04
RB1P06400 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RB1P06400 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.54■■□□□ 1.04
RB1P06400 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RB1P06400 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RB1P06400 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RB1P06400 AC005521.1-201ENST00000393351 872 ntBASIC21.54■■□□□ 1.04
RB1P06400 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.54■■□□□ 1.04
RB1P06400 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RB1P06400 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.54■■□□□ 1.04
RB1P06400 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RB1P06400 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.54■■□□□ 1.04
RB1P06400 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.54■■□□□ 1.04
RB1P06400 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RB1P06400 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RB1P06400 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.53■■□□□ 1.04
RB1P06400 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RB1P06400 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RB1P06400 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.53■■□□□ 1.04
RB1P06400 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.53■■□□□ 1.04
RB1P06400 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RB1P06400 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.53■■□□□ 1.04
RB1P06400 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.53■■□□□ 1.04
RB1P06400 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RB1P06400 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.53■■□□□ 1.04
RB1P06400 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.53■■□□□ 1.04
RB1P06400 AL031963.3-201ENST00000606441 850 ntBASIC21.53■■□□□ 1.04
RB1P06400 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RB1P06400 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RB1P06400 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RB1P06400 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RB1P06400 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RB1P06400 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RB1P06400 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RB1P06400 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RB1P06400 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RB1P06400 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RB1P06400 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RB1P06400 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.52■■□□□ 1.04
RB1P06400 LINC01568-207ENST00000641790 1380 ntBASIC21.52■■□□□ 1.04
RB1P06400 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RB1P06400 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.52■■□□□ 1.04
RB1P06400 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.52■■□□□ 1.04
RB1P06400 AC113347.1-201ENST00000413321 391 ntBASIC21.52■■□□□ 1.04
RB1P06400 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.52■■□□□ 1.04
RB1P06400 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
RB1P06400 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.52■■□□□ 1.04
RB1P06400 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.52■■□□□ 1.04
RB1P06400 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.52■■□□□ 1.04
RB1P06400 AP000525.1-201ENST00000608286 694 ntBASIC21.52■■□□□ 1.04
RB1P06400 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RB1P06400 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RB1P06400 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RB1P06400 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RB1P06400 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RB1P06400 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.51■■□□□ 1.03
RB1P06400 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RB1P06400 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RB1P06400 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RB1P06400 AC011484.1-201ENST00000377652 1995 ntBASIC21.51■■□□□ 1.03
RB1P06400 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
RB1P06400 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.51■■□□□ 1.03
RB1P06400 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RB1P06400 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.51■■□□□ 1.03
RB1P06400 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.51■■□□□ 1.03
RB1P06400 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.51■■□□□ 1.03
RB1P06400 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.51■■□□□ 1.03
RB1P06400 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RB1P06400 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RB1P06400 KRT8P9-201ENST00000558927 1449 ntBASIC21.51■■□□□ 1.03
RB1P06400 KRT18P22-201ENST00000402024 1347 ntBASIC21.51■■□□□ 1.03
RB1P06400 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.51■■□□□ 1.03
RB1P06400 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms