Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 KRT17P2-201ENST00000300992 1314 ntBASIC22.18■■□□□ 1.14
CHRNA1P02708 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHRNA1P02708 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHRNA1P02708 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CHRNA1P02708 TSPY15P-201ENST00000457163 923 ntBASIC22.18■■□□□ 1.14
CHRNA1P02708 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.18■■□□□ 1.14
CHRNA1P02708 AC023632.3-201ENST00000521633 145 ntBASIC22.18■■□□□ 1.14
CHRNA1P02708 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.18■■□□□ 1.14
CHRNA1P02708 RARRES2P10-201ENST00000564312 460 ntBASIC22.18■■□□□ 1.14
CHRNA1P02708 AP001412.1-201ENST00000608405 714 ntBASIC22.18■■□□□ 1.14
CHRNA1P02708 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHRNA1P02708 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHRNA1P02708 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CHRNA1P02708 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHRNA1P02708 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 AL024507.2-201ENST00000606070 2574 ntBASIC22.17■■□□□ 1.14
CHRNA1P02708 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.17■■□□□ 1.14
CHRNA1P02708 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.17■■□□□ 1.14
CHRNA1P02708 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.17■■□□□ 1.14
CHRNA1P02708 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.17■■□□□ 1.14
CHRNA1P02708 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.17■■□□□ 1.14
CHRNA1P02708 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.17■■□□□ 1.14
CHRNA1P02708 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.17■■□□□ 1.14
CHRNA1P02708 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.17■■□□□ 1.14
CHRNA1P02708 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.17■■□□□ 1.14
CHRNA1P02708 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CHRNA1P02708 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 AC124283.5-201ENST00000624661 1809 ntBASIC22.17■■□□□ 1.14
CHRNA1P02708 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHRNA1P02708 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CHRNA1P02708 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHRNA1P02708 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHRNA1P02708 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHRNA1P02708 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.16■■□□□ 1.14
CHRNA1P02708 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CHRNA1P02708 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.16■■□□□ 1.14
CHRNA1P02708 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CHRNA1P02708 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
CHRNA1P02708 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CHRNA1P02708 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.16■■□□□ 1.14
CHRNA1P02708 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.16■■□□□ 1.14
CHRNA1P02708 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.16■■□□□ 1.14
CHRNA1P02708 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHRNA1P02708 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHRNA1P02708 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CHRNA1P02708 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CHRNA1P02708 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CHRNA1P02708 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHRNA1P02708 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHRNA1P02708 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.15■■□□□ 1.14
CHRNA1P02708 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.15■■□□□ 1.14
CHRNA1P02708 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 PRKY-204ENST00000533551 1019 ntBASIC22.15■■□□□ 1.14
CHRNA1P02708 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.15■■□□□ 1.14
CHRNA1P02708 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CHRNA1P02708 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHRNA1P02708 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHRNA1P02708 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CHRNA1P02708 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHRNA1P02708 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHRNA1P02708 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.14■■□□□ 1.14
CHRNA1P02708 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.14■■□□□ 1.13
CHRNA1P02708 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.14■■□□□ 1.13
CHRNA1P02708 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.14■■□□□ 1.13
CHRNA1P02708 AL121829.2-201ENST00000620908 328 ntBASIC22.14■■□□□ 1.13
CHRNA1P02708 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 AL049796.1-201ENST00000565336 1766 ntBASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms