Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.76■□□□□ 0.91
TTC4O95801 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC4O95801 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC4O95801 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC4O95801 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC4O95801 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TTC4O95801 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.76■□□□□ 0.91
TTC4O95801 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
TTC4O95801 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.76■□□□□ 0.91
TTC4O95801 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
TTC4O95801 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.76■□□□□ 0.91
TTC4O95801 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TTC4O95801 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.76■□□□□ 0.91
TTC4O95801 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TTC4O95801 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.76■□□□□ 0.91
TTC4O95801 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.75■□□□□ 0.91
TTC4O95801 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TTC4O95801 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.75■□□□□ 0.91
TTC4O95801 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TTC4O95801 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TTC4O95801 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC4O95801 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC4O95801 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TTC4O95801 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.75■□□□□ 0.91
TTC4O95801 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TTC4O95801 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC4O95801 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TTC4O95801 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC4O95801 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC4O95801 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TTC4O95801 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TTC4O95801 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TTC4O95801 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TTC4O95801 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TTC4O95801 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC4O95801 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC4O95801 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TTC4O95801 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.74■□□□□ 0.91
TTC4O95801 AC123595.1-201ENST00000440769 1046 ntBASIC20.74■□□□□ 0.91
TTC4O95801 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.74■□□□□ 0.91
TTC4O95801 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TTC4O95801 DUX4L2-201ENST00000561772 1275 ntBASIC20.74■□□□□ 0.91
TTC4O95801 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.74■□□□□ 0.91
TTC4O95801 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
TTC4O95801 DUX4L6-201ENST00000626483 1275 ntBASIC20.74■□□□□ 0.91
TTC4O95801 DUX4L1-201ENST00000627662 1275 ntBASIC20.74■□□□□ 0.91
TTC4O95801 DUX4L8-201ENST00000629013 1275 ntBASIC20.74■□□□□ 0.91
TTC4O95801 DUX4L3-201ENST00000630187 1275 ntBASIC20.74■□□□□ 0.91
TTC4O95801 DUX4L7-201ENST00000630678 1275 ntBASIC20.74■□□□□ 0.91
TTC4O95801 DUX4L5-201ENST00000630834 1275 ntBASIC20.74■□□□□ 0.91
TTC4O95801 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC4O95801 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC4O95801 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.74■□□□□ 0.91
TTC4O95801 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC4O95801 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TTC4O95801 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.74■□□□□ 0.91
TTC4O95801 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.73■□□□□ 0.91
TTC4O95801 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TTC4O95801 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TTC4O95801 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.73■□□□□ 0.91
TTC4O95801 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TTC4O95801 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.73■□□□□ 0.91
TTC4O95801 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TTC4O95801 AC018445.3-201ENST00000624177 1945 ntBASIC20.72■□□□□ 0.91
TTC4O95801 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TTC4O95801 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.72■□□□□ 0.91
TTC4O95801 AL158211.5-201ENST00000623583 2518 ntBASIC20.72■□□□□ 0.91
TTC4O95801 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.72■□□□□ 0.91
TTC4O95801 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.72■□□□□ 0.91
TTC4O95801 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC4O95801 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TTC4O95801 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC4O95801 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.72■□□□□ 0.91
TTC4O95801 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC4O95801 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC4O95801 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.72■□□□□ 0.91
TTC4O95801 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.72■□□□□ 0.91
TTC4O95801 MIR2861-201ENST00000636310 90 ntBASIC20.72■□□□□ 0.91
TTC4O95801 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC4O95801 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC4O95801 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC4O95801 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC4O95801 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC4O95801 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC4O95801 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TTC4O95801 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TTC4O95801 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TTC4O95801 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TTC4O95801 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms