Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP1R3DO95685 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP1R3DO95685 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PPP1R3DO95685 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPP1R3DO95685 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.28■□□□□ 0.52
PPP1R3DO95685 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.28■□□□□ 0.52
PPP1R3DO95685 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PPP1R3DO95685 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.28■□□□□ 0.52
PPP1R3DO95685 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP1R3DO95685 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPP1R3DO95685 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP1R3DO95685 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP1R3DO95685 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PPP1R3DO95685 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PPP1R3DO95685 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP1R3DO95685 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP1R3DO95685 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP1R3DO95685 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP1R3DO95685 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP1R3DO95685 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.27■□□□□ 0.52
PPP1R3DO95685 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP1R3DO95685 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.27■□□□□ 0.52
PPP1R3DO95685 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.27■□□□□ 0.52
PPP1R3DO95685 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.27■□□□□ 0.52
PPP1R3DO95685 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.27■□□□□ 0.52
PPP1R3DO95685 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.27■□□□□ 0.52
PPP1R3DO95685 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
PPP1R3DO95685 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.27■□□□□ 0.51
PPP1R3DO95685 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PPP1R3DO95685 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PPP1R3DO95685 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.27■□□□□ 0.51
PPP1R3DO95685 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PPP1R3DO95685 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PPP1R3DO95685 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 KRT8P36-201ENST00000489121 1440 ntBASIC18.26■□□□□ 0.51
PPP1R3DO95685 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 DPP3P2-201ENST00000416030 1696 ntBASIC18.26■□□□□ 0.51
PPP1R3DO95685 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.26■□□□□ 0.51
PPP1R3DO95685 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PPP1R3DO95685 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 ZNRF2P3-201ENST00000424200 374 ntBASIC18.25■□□□□ 0.51
PPP1R3DO95685 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 SLC7A5P1-201ENST00000568957 537 ntBASIC18.25■□□□□ 0.51
PPP1R3DO95685 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PPP1R3DO95685 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.25■□□□□ 0.51
PPP1R3DO95685 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.24■□□□□ 0.51
PPP1R3DO95685 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PPP1R3DO95685 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.24■□□□□ 0.51
PPP1R3DO95685 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms