Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
PCF11O94913 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
PCF11O94913 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC31.86■■■□□ 2.69
PCF11O94913 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC31.86■■■□□ 2.69
PCF11O94913 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC31.86■■■□□ 2.69
PCF11O94913 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
PCF11O94913 BID-212ENST00000614949 1988 ntTSL 5 BASIC31.86■■■□□ 2.69
PCF11O94913 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PCF11O94913 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
PCF11O94913 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
PCF11O94913 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC31.86■■■□□ 2.69
PCF11O94913 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCF11O94913 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC31.85■■■□□ 2.69
PCF11O94913 THEM4-205ENST00000489410 643 ntTSL 2 BASIC31.85■■■□□ 2.69
PCF11O94913 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCF11O94913 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PCF11O94913 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
PCF11O94913 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC31.85■■■□□ 2.69
PCF11O94913 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
PCF11O94913 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCF11O94913 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PCF11O94913 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PCF11O94913 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
PCF11O94913 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCF11O94913 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC31.85■■■□□ 2.69
PCF11O94913 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC31.85■■■□□ 2.69
PCF11O94913 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCF11O94913 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
PCF11O94913 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC31.85■■■□□ 2.69
PCF11O94913 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCF11O94913 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC31.85■■■□□ 2.69
PCF11O94913 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC31.85■■■□□ 2.69
PCF11O94913 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC31.84■■■□□ 2.69
PCF11O94913 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
PCF11O94913 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
PCF11O94913 RCN1P1-201ENST00000400413 996 ntBASIC31.84■■■□□ 2.69
PCF11O94913 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
PCF11O94913 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PCF11O94913 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
PCF11O94913 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC31.83■■■□□ 2.69
PCF11O94913 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PCF11O94913 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
PCF11O94913 RPS2P55-201ENST00000397318 883 ntBASIC31.83■■■□□ 2.69
PCF11O94913 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC31.83■■■□□ 2.69
PCF11O94913 TSPY7P-201ENST00000431358 1114 ntBASIC31.83■■■□□ 2.69
PCF11O94913 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC31.83■■■□□ 2.69
PCF11O94913 AC107956.1-201ENST00000494359 873 ntBASIC31.83■■■□□ 2.69
PCF11O94913 AC023632.3-201ENST00000521633 145 ntBASIC31.83■■■□□ 2.69
PCF11O94913 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
PCF11O94913 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
PCF11O94913 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PCF11O94913 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
PCF11O94913 FEM1AP4-201ENST00000443167 1987 ntBASIC31.83■■■□□ 2.69
PCF11O94913 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PCF11O94913 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PCF11O94913 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PCF11O94913 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC31.82■■■□□ 2.68
PCF11O94913 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
PCF11O94913 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC31.82■■■□□ 2.68
PCF11O94913 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PCF11O94913 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
PCF11O94913 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC31.82■■■□□ 2.68
PCF11O94913 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC31.82■■■□□ 2.68
PCF11O94913 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PCF11O94913 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC31.82■■■□□ 2.68
PCF11O94913 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PCF11O94913 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC31.82■■■□□ 2.68
PCF11O94913 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
PCF11O94913 AL390719.1-204ENST00000412397 1219 ntBASIC31.81■■■□□ 2.68
PCF11O94913 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
PCF11O94913 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC31.81■■■□□ 2.68
PCF11O94913 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCF11O94913 AC113410.3-201ENST00000623366 203 ntBASIC31.81■■■□□ 2.68
PCF11O94913 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PCF11O94913 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCF11O94913 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCF11O94913 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCF11O94913 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCF11O94913 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCF11O94913 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
PCF11O94913 DHDH-203ENST00000522614 776 ntTSL 5 BASIC31.81■■■□□ 2.68
PCF11O94913 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC31.81■■■□□ 2.68
PCF11O94913 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
PCF11O94913 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC31.81■■■□□ 2.68
PCF11O94913 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC31.8■■■□□ 2.68
PCF11O94913 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PCF11O94913 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
PCF11O94913 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PCF11O94913 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
PCF11O94913 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PCF11O94913 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PCF11O94913 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC31.8■■■□□ 2.68
PCF11O94913 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC31.8■■■□□ 2.68
PCF11O94913 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.8■■■□□ 2.68
PCF11O94913 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC31.8■■■□□ 2.68
PCF11O94913 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
PCF11O94913 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
PCF11O94913 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC31.8■■■□□ 2.68
PCF11O94913 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PCF11O94913 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms